RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 SIRPAP78324 504 aa16.6■□□□□ 0.25
PTN-201ENST00000348225 TEX30Q5JUR7 227 aa16.6■□□□□ 0.25
PTN-201ENST00000348225 ZNF684Q5T5D7 378 aa16.6■□□□□ 0.25
PTN-201ENST00000348225 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.6■□□□□ 0.25
PTN-201ENST00000348225 OR10H5Q8NGA6 315 aa16.6■□□□□ 0.25
PTN-201ENST00000348225 OR6N1Q8NGY5 312 aa16.6■□□□□ 0.25
PTN-201ENST00000348225 NEIL3Q8TAT5 605 aa16.6■□□□□ 0.25
PTN-201ENST00000348225 INTS12Q96CB8 462 aaKnown RBP16.6■□□□□ 0.25
PTN-201ENST00000348225 OR2M2Q96R28 347 aa16.6■□□□□ 0.25
PTN-201ENST00000348225 RNF167Q9H6Y7 350 aa16.6■□□□□ 0.25
PTN-201ENST00000348225 EXO5Q9H790 373 aa16.6■□□□□ 0.25
PTN-201ENST00000348225 ZDHHC11Q9H8X9 412 aa16.6■□□□□ 0.25
PTN-201ENST00000348225 ST6GALNAC2Q9UJ37 374 aa16.6■□□□□ 0.25
PTN-201ENST00000348225 IKZF2Q9UKS7 526 aa16.6■□□□□ 0.25
PTN-201ENST00000348225 RCE1Q9Y256 329 aa16.6■□□□□ 0.25
PTN-201ENST00000348225 SIRT4Q9Y6E7 314 aaPredicted RBP16.6■□□□□ 0.25
PTN-201ENST00000348225 TRGV5A0A0B4J1U4 118 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 TFECO14948 347 aaPredicted RBP16.59■□□□□ 0.25
PTN-201ENST00000348225 MAGEB4O15481 346 aaPredicted RBP16.59■□□□□ 0.25
PTN-201ENST00000348225 OGG1O15527 345 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 CYTIPO60759 359 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 TMCC2O75069 709 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 RGS9O75916 674 aaPredicted RBP16.59■□□□□ 0.25
PTN-201ENST00000348225 CLPXO76031 633 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 AQP8O94778 261 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 SYNGR4O95473 234 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 LAP3P28838 519 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 FGF9P31371 208 aaPredicted RBP16.59■□□□□ 0.25
PTN-201ENST00000348225 TGM4P49221 684 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 FABP5Q01469 135 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 CDK5R1Q15078 307 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 DMKNQ6E0U4 476 aaPredicted RBP16.59■□□□□ 0.25
PTN-201ENST00000348225 KCTD18Q6PI47 426 aaPredicted RBP16.59■□□□□ 0.25
PTN-201ENST00000348225 SLC25A47Q6Q0C1 308 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 FCRLAQ7L513 359 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 YIPF7Q8N8F6 280 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 ROBO4Q8WZ75 1007 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 MCHR2Q969V1 340 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 SMIM19Q96E16 107 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 TRMT61AQ96FX7 289 aaKnown RBP16.59■□□□□ 0.25
PTN-201ENST00000348225 KCTD7Q96MP8 289 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 ZNF385AQ96PM9 386 aaKnown RBP16.59■□□□□ 0.25
PTN-201ENST00000348225 KCNN2Q9H2S1 579 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 SIAEQ9HAT2 523 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 GLTPQ9NZD2 209 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 CCDC59Q9P031 241 aaKnown RBP16.59■□□□□ 0.25
PTN-201ENST00000348225 SSUH2Q9Y2M2 353 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 PCDHGA9Q9Y5G4 932 aaKnown RBP16.59■□□□□ 0.25
PTN-201ENST00000348225 A0A1W2PPL8 197 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 ZNF716A6NP11 495 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 CD1AP06126 327 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 QDPRP09417 244 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 OR8G3PP0DMU2 310 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 ZNF24P17028 368 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 EDNRAP25101 427 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 RPS27P42677 84 aaKnown RBP16.59■□□□□ 0.25
PTN-201ENST00000348225 SRYQ05066 204 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 SLC3A1Q07837 685 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 EIF2B1Q14232 305 aaKnown RBP16.59■□□□□ 0.25
PTN-201ENST00000348225 MEP1BQ16820 701 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 C22orf42Q6IC83 251 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 IGFL3Q6UXB1 125 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 RPTNQ6XPR3 784 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 MS4A15Q8N5U1 240 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 TMEM54Q969K7 222 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 ZNF845Q96IR2 970 aaPredicted RBP16.59■□□□□ 0.25
PTN-201ENST00000348225 DEFB127Q9H1M4 99 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 MRM2Q9UI43 246 aaKnown RBP16.59■□□□□ 0.25
PTN-201ENST00000348225 MCTS1Q9ULC4 181 aaKnown RBP16.59■□□□□ 0.25
PTN-201ENST00000348225 GRIP1Q9Y3R0 1128 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 FLVCR1Q9Y5Y0 555 aa16.59■□□□□ 0.25
PTN-201ENST00000348225 PRR32B1ATL7 298 aa16.58■□□□□ 0.24
PTN-201ENST00000348225 PSMD9O00233 223 aa16.58■□□□□ 0.24
PTN-201ENST00000348225 LRRTM2O43300 516 aa16.58■□□□□ 0.24
PTN-201ENST00000348225 MPZL1O95297 269 aa16.58■□□□□ 0.24
PTN-201ENST00000348225 SOX6P35712 828 aa16.58■□□□□ 0.24
PTN-201ENST00000348225 RASGEF1BQ0VAM2 473 aa16.58■□□□□ 0.24
PTN-201ENST00000348225 PCK2Q16822 640 aa16.58■□□□□ 0.24
PTN-201ENST00000348225 TMEM123Q8N131 208 aa16.58■□□□□ 0.24
PTN-201ENST00000348225 ZIC4Q8N9L1 334 aa16.58■□□□□ 0.24
PTN-201ENST00000348225 OR8B4Q96RC9 309 aa16.58■□□□□ 0.24
PTN-201ENST00000348225 CDADC1Q9BWV3 514 aa16.58■□□□□ 0.24
PTN-201ENST00000348225 LIPGQ9Y5X9 500 aa16.58■□□□□ 0.24
PTN-201ENST00000348225 AKAP13Q12802 2813 aa16.58■□□□□ 0.24
PTN-201ENST00000348225 TRBV2A0A0J9YWF9 115 aa16.57■□□□□ 0.24
PTN-201ENST00000348225 GABRPO00591 440 aa16.57■□□□□ 0.24
PTN-201ENST00000348225 ZNF432O94892 652 aa16.57■□□□□ 0.24
PTN-201ENST00000348225 ABHD16AO95870 558 aa16.57■□□□□ 0.24
PTN-201ENST00000348225 SERPINA3P01011 423 aa16.57■□□□□ 0.24
PTN-201ENST00000348225 ITGB2P05107 769 aa16.57■□□□□ 0.24
PTN-201ENST00000348225 PSKH1P11801 424 aa16.57■□□□□ 0.24
PTN-201ENST00000348225 GDI2P50395 445 aaKnown RBP16.57■□□□□ 0.24
PTN-201ENST00000348225 ZNF133P52736 654 aaPredicted RBP16.57■□□□□ 0.24
PTN-201ENST00000348225 PMP22Q01453 160 aa16.57■□□□□ 0.24
PTN-201ENST00000348225 RNFT1Q5M7Z0 435 aa16.57■□□□□ 0.24
PTN-201ENST00000348225 LIPNQ5VXI9 398 aa16.57■□□□□ 0.24
PTN-201ENST00000348225 CHMP1BQ7LBR1 199 aa16.57■□□□□ 0.24
PTN-201ENST00000348225 OR52N5Q8NH56 324 aa16.57■□□□□ 0.24
PTN-201ENST00000348225 TBC1D15Q8TC07 691 aa16.57■□□□□ 0.24
PTN-201ENST00000348225 C11orf40Q8WZ69 217 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms