RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 CCNL2Q96S94 520 aaPredicted RBP13.45□□□□□ -0.26
NUP50-201ENST00000347635 SLC25A32Q9H2D1 315 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 ZMAT3Q9HA38 289 aaKnown RBP13.45□□□□□ -0.26
NUP50-201ENST00000347635 RPS10P5Q9NQ39 176 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 SLC22A23A1A5C7 686 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 GPR3P46089 330 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 CLDN6P56747 220 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 ACTBL2Q562R1 376 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 BCORP1Q8N888 145 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 OR1F2PQ96R84 312 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 DICER1Q9UPY3 1922 aaKnown RBP13.45□□□□□ -0.26
NUP50-201ENST00000347635 LILRA5A6NI73 299 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 LIMS1P48059 325 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 C9orf62Q8N4C0 152 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 ABHD1Q96SE0 405 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 ZFP57Q9NU63 452 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 SLC7A11Q9UPY5 501 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 H0Y8X5 98 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 CDC42EP2O14613 210 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 DLX2Q07687 328 aaPredicted RBP13.45□□□□□ -0.26
NUP50-201ENST00000347635 EEF1A1P5Q5VTE0 462 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 LIX1LQ8IVB5 337 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 GABRG1Q8N1C3 465 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 NKAIN3Q8N8D7 197 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 MVB12AQ96EY5 273 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 LCORQ96JN0 433 aaPredicted RBP13.45□□□□□ -0.26
NUP50-201ENST00000347635 SLC46A1Q96NT5 459 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 MICU1Q9BPX6 476 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 ACAD8Q9UKU7 415 aa13.45□□□□□ -0.26
NUP50-201ENST00000347635 LEUTXA8MZ59 168 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 DOK2O60496 412 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 TMEM225BP0DP42 221 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 GLB1P16278 677 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 EMC4Q5J8M3 183 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 FAM160A2Q8N612 972 aaPredicted RBP13.44□□□□□ -0.26
NUP50-201ENST00000347635 C17orf47Q8NEP4 570 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 MARC2Q969Z3 335 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 SCPEP1Q9HB40 452 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 MRPS18AQ9NVS2 196 aaKnown RBP13.44□□□□□ -0.26
NUP50-201ENST00000347635 FAM71CQ8NEG0 241 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 OR52B4Q8NGK2 314 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 CHAC2Q8WUX2 184 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 RNF141Q8WVD5 230 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 PADI1Q9ULC6 663 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 LMO7DNF2Z398 122 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 SERPINA5P05154 406 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 CDH26Q8IXH8 852 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 ZNF679Q8IYX0 411 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 OR2AK2Q8NG84 335 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 OR14L1PQ8NHC6 308 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 ANK1P16157 1881 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 TMED7-TICAM2A0A0A6YYA0 188 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 HTR3BO95264 441 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 ZP3P21754 424 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 OR1D4P47884 311 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 OR1D5P58170 312 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 EGR3Q06889 387 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 MELKQ14680 651 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 C5orf46Q6UWT4 87 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 BAHD1Q8TBE0 780 aaPredicted RBP13.44□□□□□ -0.26
NUP50-201ENST00000347635 FER1L6-AS2Q96M78 137 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 SLC19A3Q9BZV2 496 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 SEMA4CQ9C0C4 833 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 CGGBP1Q9UFW8 167 aaPredicted RBP13.44□□□□□ -0.26
NUP50-201ENST00000347635 RAB22AQ9UL26 194 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 TMED7Q9Y3B3 224 aa13.44□□□□□ -0.26
NUP50-201ENST00000347635 A0A0B4J2E0 115 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 TRBV11-1A0A0K0K1C0 115 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 A0A1B0GX12 115 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 P2RY10O00398 339 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 MED6O75586 246 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 GNRHRP30968 328 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 PMPCAQ10713 525 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 SLC22A6Q4U2R8 563 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 CCDC74AQ96AQ1 378 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 NKX6-2Q9C056 277 aaPredicted RBP13.43□□□□□ -0.26
NUP50-201ENST00000347635 PIGMQ9H3S5 423 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 CCSO14618 274 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 GMDSO60547 372 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 IL5P05113 134 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 ADRB1P08588 477 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 OR8U9P0C7N5 309 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 C3orf33Q6P1S2 294 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 TP53I13Q8NBR0 393 aaPredicted RBP13.43□□□□□ -0.26
NUP50-201ENST00000347635 OR13C9Q8NGT0 318 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 SYT3Q9BQG1 590 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 ZNF160Q9HCG1 818 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 PLEKHJ1Q9NW61 149 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 A0A1B0GV50 99 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 E9PI62 339 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 SIGLEC6O43699 453 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 OR2F2O95006 317 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 CAPZBP47756 277 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 OR2F1Q13607 317 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 PGAP1Q75T13 922 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 SLC22A24Q8N4F4 322 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 TOMM40LQ969M1 308 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 TSSK2Q96PF2 358 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 PRRX2Q99811 253 aa13.43□□□□□ -0.26
NUP50-201ENST00000347635 TAS2R4Q9NYW5 299 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms