RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 BRICD5Q6PL45 260 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 MSRB3Q8IXL7 192 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 OR5M1Q8NGP8 315 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 OR6K3Q8NGY3 331 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 VDAC3Q9Y277 283 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 CAMK2BQ13554 666 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 ZNF750Q32MQ0 723 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 FCRL6Q6DN72 434 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 EDAQ92838 391 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 TXN2Q99757 166 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 SLC6A13Q9NSD5 602 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 HSPB2A8KAH6 182 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 RNF212BA8MTL3 300 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 RNASEK-C17orf49H0YIS7 233 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 PYCARD-AS1I3L0S3 204 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 ZNF133P52736 654 aaPredicted RBP16.59■□□□□ 0.25
SMC4-201ENST00000344722 HSPB2Q16082 182 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 GLIPR1L1Q6UWM5 242 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 CYHR1Q6ZMK1 362 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 SGPP1Q9BX95 441 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 HEPACAM2A8MVW5 462 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 XRCC3O43542 346 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 DUX1O43812 170 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 CSNK1G2P78368 415 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 MELKQ14680 651 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 PLCXD3Q63HM9 321 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 OR1J1Q8NGS3 322 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 STARD5Q9NSY2 213 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 AK3Q9UIJ7 227 aa16.59■□□□□ 0.25
SMC4-201ENST00000344722 LOC102725191A0A1B0GVB3 256 aa16.58■□□□□ 0.25
SMC4-201ENST00000344722 SUSD5O60279 629 aa16.58■□□□□ 0.25
SMC4-201ENST00000344722 DBHP09172 617 aa16.58■□□□□ 0.25
SMC4-201ENST00000344722 DUSP1P28562 367 aa16.58■□□□□ 0.25
SMC4-201ENST00000344722 VN1R3Q9BXE9 311 aa16.58■□□□□ 0.25
SMC4-201ENST00000344722 APOBEC3BQ9UH17 382 aaKnown RBP16.58■□□□□ 0.25
SMC4-201ENST00000344722 RREB1Q92766 1687 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 ZFP92A6NM28 416 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 DDAH2O95865 285 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 AADACP22760 399 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 RNF165Q6ZSG1 346 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 TMPPEQ6ZT21 453 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 PLEKHB1Q9UF11 243 aaPredicted RBP16.58■□□□□ 0.24
SMC4-201ENST00000344722 HMSDA8MTL9 139 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 UPK1AO00322 258 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 BET1O15155 118 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 INHBBP09529 407 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 NID1P14543 1247 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 EPHA4P54764 986 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 MRPL21Q7Z2W9 205 aaKnown RBP16.58■□□□□ 0.24
SMC4-201ENST00000344722 ZNF595Q8IYB9 648 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 PRR18Q8N4B5 295 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 PHYHIPLQ96FC7 376 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 A6NLC8 198 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 CEBPZOSA8MTT3 80 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 CYB5BO43169 146 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 MBP02144 154 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 WNT1P04628 370 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 ANGPTL5Q86XS5 388 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 COMMD1Q8N668 190 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 TMEM217Q8N7C4 229 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 GNPNAT1Q96EK6 184 aaPredicted RBP16.58■□□□□ 0.24
SMC4-201ENST00000344722 ASH2LQ9UBL3 628 aa16.58■□□□□ 0.24
SMC4-201ENST00000344722 ZNF354AO60765 605 aaPredicted RBP16.57■□□□□ 0.24
SMC4-201ENST00000344722 LRP5O75197 1615 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 HIST1H1CP16403 213 aaKnown RBP16.57■□□□□ 0.24
SMC4-201ENST00000344722 SLC6A1P30531 599 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 MTCP1P56278 107 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 MPPED2Q15777 294 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 CLEC1AQ8NC01 280 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 COL22A1Q8NFW1 1626 aaPredicted RBP16.57■□□□□ 0.24
SMC4-201ENST00000344722 Q96M85 177 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 TAS2R4Q9NYW5 299 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 SULT2B1O00204 365 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 BCKDHBP21953 392 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 OR2W3Q7Z3T1 314 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 CAMKMTQ7Z624 323 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 SPNS2Q8IVW8 549 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 C2orf50Q96LR7 162 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 SLC46A1Q96NT5 459 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.57■□□□□ 0.24
SMC4-201ENST00000344722 OR1D4P47884 311 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 MLC1Q15049 377 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 FAM185AQ8N0U4 392 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 TMEM229BQ8NBD8 167 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 LPAR4Q99677 370 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 PCDHGA1Q9Y5H4 931 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 ZNF250P15622 560 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 DPP4P27487 766 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 C2orf76Q3KRA6 126 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 MCATQ8IVS2 390 aaKnown RBP16.57■□□□□ 0.24
SMC4-201ENST00000344722 MKXQ8IYA7 352 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 ZNF485Q8NCK3 441 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 BVESQ8NE79 360 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 AKR7LQ8NHP1 331 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 DUSP22Q9NRW4 184 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 PCDHB10Q9UN67 800 aa16.57■□□□□ 0.24
SMC4-201ENST00000344722 SCAF4O95104 1147 aaKnown RBP16.56■□□□□ 0.24
SMC4-201ENST00000344722 CBX7O95931 251 aa16.56■□□□□ 0.24
SMC4-201ENST00000344722 RABIFP47224 123 aa16.56■□□□□ 0.24
SMC4-201ENST00000344722 PDLIM3Q53GG5 364 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms