RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 SMURF1Q9HCE7 757 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 A3GALT2U3KPV4 340 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 PIN1P1O15428 100 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 CRABP1P29762 137 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 TNFSF8P32971 234 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 MAGEA5P43359 124 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 CLDN17P56750 224 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 MADCAM1Q13477 382 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 ODF4Q2M2E3 257 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 LINC00299Q6ZSB3 139 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 ZIC4Q8N9L1 334 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 OR10AC1Q8NH08 325 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 SLC25A44Q96H78 314 aaPredicted RBP12.08□□□□□ -0.48
CDC42-202ENST00000344548 ADGRG7Q96K78 797 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 SFXN2Q96NB2 322 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 IP6K3Q96PC2 410 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 ELOVL3Q9HB03 270 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 HMG20AQ9NP66 347 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 POLHQ9Y253 713 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 KIAA1549Q9HCM3 1950 aa12.08□□□□□ -0.48
CDC42-202ENST00000344548 RTTNQ86VV8 2226 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 A0A075B6Q4 140 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 TRABD2BA6NFA1 517 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 ITGB2P05107 769 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 FKBP2P26885 142 aaKnown RBP12.07□□□□□ -0.48
CDC42-202ENST00000344548 ZNF846Q147U1 533 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 ZMAT1Q5H9K5 638 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 CREB3L2Q70SY1 520 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 PRSS35Q8N3Z0 413 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 PARP16Q8N5Y8 322 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 MDS2Q8NDY4 140 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 ROBO4Q8WZ75 1007 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 ZNF845Q96IR2 970 aaPredicted RBP12.07□□□□□ -0.48
CDC42-202ENST00000344548 OR8B4Q96RC9 309 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 FAM173AQ9BQD7 235 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 MFRPQ9BY79 579 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 TTTY12Q9BZ98 90 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 FBXL3Q9UKT7 428 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 LOC102725191A0A1B0GVB3 256 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 ANKRD61A6NGH8 418 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 ACOD1A6NK06 481 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 RGS5O15539 181 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 CXCL13O43927 109 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 DOK2O60496 412 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 SLC17A1Q14916 467 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 HIST3H3Q16695 136 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 C16orf87Q6PH81 154 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 CCDC190Q86UF4 302 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 NOXO1Q8NFA2 376 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 OR51A4Q8NGJ6 313 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 OR6X1Q8NH79 312 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 FNDC8Q8TC99 324 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 C11orf40Q8WZ69 217 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 MCHR2Q969V1 340 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 COQ7Q99807 217 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 OR2B2Q9GZK3 357 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 SIAEQ9HAT2 523 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 ABCB9Q9NP78 766 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 B3GAT2Q9NPZ5 323 aa12.07□□□□□ -0.48
CDC42-202ENST00000344548 EFSO43281 561 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 KRT8P05787 483 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 SP1P08047 785 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 CD53P19397 219 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 GALP22466 123 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 CASRP41180 1078 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 KIR3DL2P43630 455 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 CLRN1P58418 232 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 EIF2B1Q14232 305 aaKnown RBP12.06□□□□□ -0.48
CDC42-202ENST00000344548 CCDC58Q4VC31 144 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 OR7E24Q6IFN5 339 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 DCXRQ7Z4W1 244 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 TMEM251Q8N6I4 163 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 FDCSPQ8NFU4 85 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 ST7LQ8TDW4 575 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 SDHCQ99643 169 aaPredicted RBP12.06□□□□□ -0.48
CDC42-202ENST00000344548 SLC6A15Q9H2J7 730 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 EMC7Q9NPA0 242 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 DMXL2Q8TDJ6 3036 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 A0A0G2JK05 382 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 IQCMA0A1B0GVH7 501 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 OR5H15A6NDH6 313 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 PROB1E7EW31 1015 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 KHDRBS3O75525 346 aaKnown RBP12.06□□□□□ -0.48
CDC42-202ENST00000344548 SULT1C4O75897 302 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 SELENOPP49908 381 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 CCL11P51671 97 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 AGFG1P52594 562 aaKnown RBP12.06□□□□□ -0.48
CDC42-202ENST00000344548 EGR3Q06889 387 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 MFGE8Q08431 387 aaPredicted RBP12.06□□□□□ -0.48
CDC42-202ENST00000344548 CLN3Q13286 438 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 PCK2Q16822 640 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 RNFT1Q5M7Z0 435 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 AGAP7PQ5VUJ5 663 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 SLC25A47Q6Q0C1 308 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 IGF2-ASQ6U949 168 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 TRILQ7L0X0 811 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 OR2G2Q8NGZ5 317 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 OR10D3Q8NH80 312 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 S100ZQ8WXG8 99 aa12.06□□□□□ -0.48
CDC42-202ENST00000344548 ZNF837Q96EG3 531 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms