RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 NXF2Q9GZY0 626 aaKnown RBP12.59□□□□□ -0.39
TRIO-202ENST00000344204 AWAT1Q58HT5 328 aa12.58□□□□□ -0.39
TRIO-202ENST00000344204 OR4F5Q8NH21 305 aa12.58□□□□□ -0.39
TRIO-202ENST00000344204 ATOH1Q92858 354 aaPredicted RBP12.58□□□□□ -0.39
TRIO-202ENST00000344204 OR4F4Q96R69 305 aa12.58□□□□□ -0.39
TRIO-202ENST00000344204 NDUFB6O95139 128 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 APEHP13798 732 aaKnown RBP12.58□□□□□ -0.4
TRIO-202ENST00000344204 GPX2P18283 190 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 RPL12P30050 165 aaKnown RBP12.58□□□□□ -0.4
TRIO-202ENST00000344204 SELENOPP49908 381 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 OR5I1Q13606 314 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 GLYATL3Q5SZD4 288 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 SUSD3Q96L08 255 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 NUDT9Q9BW91 350 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 TMEM59Q9BXS4 323 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 UCK1Q9HA47 277 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 MARF1Q9Y4F3 1742 aaKnown RBP12.58□□□□□ -0.4
TRIO-202ENST00000344204 GPR18Q14330 331 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 TOMM34Q15785 309 aaPredicted RBP12.58□□□□□ -0.4
TRIO-202ENST00000344204 SMIM19Q96E16 107 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 PDCD1LG2Q9BQ51 273 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 PELI2Q9HAT8 420 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 LAMP3Q9UQV4 416 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 B4GALT3O60512 393 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 MSMO1Q15800 293 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 PDLIM3Q53GG5 364 aaPredicted RBP12.58□□□□□ -0.4
TRIO-202ENST00000344204 DCAF4L2Q8NA75 395 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 OR6K3Q8NGY3 331 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 FBXO17Q96EF6 278 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 KLHL42Q9P2K6 505 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 RTCAO00442 366 aaKnown RBP12.58□□□□□ -0.4
TRIO-202ENST00000344204 TAS2R60P59551 318 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 PIANPQ8IYJ0 282 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 TRAV1-2A0A0B4J238 106 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 TMEM127O75204 238 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 SOX18P35713 384 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 TESK1Q15569 626 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 ZNF124Q15973 351 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 GNPNAT1Q96EK6 184 aaPredicted RBP12.58□□□□□ -0.4
TRIO-202ENST00000344204 SIRT3Q9NTG7 399 aaPredicted RBP12.58□□□□□ -0.4
TRIO-202ENST00000344204 FBXL12Q9NXK8 326 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 ASIC5Q9NY37 505 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 B3GALT5Q9Y2C3 310 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 ADM5C9JUS6 153 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 E5RGE8 158 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 OR1Q1Q15612 314 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 EXOSC6Q5RKV6 272 aaKnown RBP12.58□□□□□ -0.4
TRIO-202ENST00000344204 FAM24BQ8N5W8 94 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 OR6N1Q8NGY5 312 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 DPF1Q92782 380 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 RASD2Q96D21 266 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 ARHGAP9Q9BRR9 750 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 DPH7Q9BTV6 452 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 NSG2Q9Y328 171 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 FREM1Q5H8C1 2179 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 OR5H15A6NDH6 313 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 OR5H1A6NKK0 313 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 NPIPA2E9PIF3 369 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 NPIPA3F8WFD2 350 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 SUSD5O60279 629 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 ATXN1LP0C7T5 689 aaKnown RBP12.58□□□□□ -0.4
TRIO-202ENST00000344204 DUSP1P28562 367 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 TMEM244Q5VVB8 128 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 KLRG1Q96E93 195 aa12.58□□□□□ -0.4
TRIO-202ENST00000344204 TNRC6AQ8NDV7 1962 aaKnown RBP12.57□□□□□ -0.4
TRIO-202ENST00000344204 HNRNPKP61978 463 aaKnown RBP eCLIP12.57□□□□□ -0.41e-10■■■■■ 34.9
TRIO-202ENST00000344204 REC114Q7Z4M0 266 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 DEFB128Q7Z7B8 93 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 TAAR9Q96RI9 348 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 ZNF552Q9H707 407 aaPredicted RBP12.57□□□□□ -0.4
TRIO-202ENST00000344204 KLRF1Q9NZS2 232 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 RNF150Q9ULK6 438 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 CHRM4P08173 479 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 ACTR1BP42025 376 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 ZNF90Q03938 601 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 PRDM7Q9NQW5 492 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 CBLCQ9ULV8 474 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 FUT1P19526 365 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 OLIG1Q8TAK6 271 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 FRMPD3Q5JV73 1810 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 B4GALT2O60909 372 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 ADRA1AP35348 466 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 TEAD2Q15562 447 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 DDA1Q9BW61 102 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 L3MBTL4Q8NA19 623 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 SGCAQ16586 387 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 OR9A2Q8NGT5 310 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 WNT7BP56706 349 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 ARSIQ5FYB1 569 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 Q6ZSR9 355 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 GRINAQ7Z429 371 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 POLMQ9NP87 494 aaPredicted RBP12.57□□□□□ -0.4
TRIO-202ENST00000344204 ARL2-SNX15V9GYD0 113 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 C17orf112F2Z3M2 114 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 SULT1A3P0DMM9 295 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 SULT1A4P0DMN0 295 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 GSK3AP49840 483 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 SNRPNP63162 240 aaKnown RBP12.57□□□□□ -0.4
TRIO-202ENST00000344204 LINC00303Q3SY05 128 aa12.57□□□□□ -0.4
TRIO-202ENST00000344204 RCBTB1Q8NDN9 531 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms