RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 ADAM30Q9UKF2 790 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 KLF2Q9Y5W3 355 aaPredicted RBP11.8□□□□□ -0.52
COL18A1-201ENST00000342220 ROS1P08922 2347 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 COL6A6A6NMZ7 2263 aa11.8□□□□□ -0.52
COL18A1-201ENST00000342220 TMED7-TICAM2A0A0A6YYA0 188 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 SLC22A23A1A5C7 686 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 J3QRE1 110 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 TRIM3O75382 744 aaPredicted RBP11.79□□□□□ -0.52
COL18A1-201ENST00000342220 RGS9O75916 674 aaPredicted RBP11.79□□□□□ -0.52
COL18A1-201ENST00000342220 AHSA1O95433 338 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 SLC6A6P31641 620 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 FXYD6P3P58550 94 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 SRYQ05066 204 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF468Q5VIY5 522 aaPredicted RBP11.79□□□□□ -0.52
COL18A1-201ENST00000342220 ACBD7Q8N6N7 88 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 PLPP5Q8NEB5 264 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 TAAR8Q969N4 342 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 TIMP4Q99727 224 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 ZCCHC4Q9H5U6 513 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 LDAHQ9H6V9 325 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 GRHPRQ9UBQ7 328 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 SPATA2Q9UM82 520 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 FARSAQ9Y285 508 aaKnown RBP11.79□□□□□ -0.52
COL18A1-201ENST00000342220 SIGLEC7Q9Y286 467 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 TMED7Q9Y3B3 224 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 IGHV3-15A0A0B4J1V0 119 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 INMT-MINDY4F8WBC2 141 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 ORC5O43913 435 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 FABP1P07148 127 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 SPINK2P20155 84 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 PSMB10P40306 273 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 MAP3K8P41279 467 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 SRSF6Q13247 344 aaKnown RBP11.79□□□□□ -0.52
COL18A1-201ENST00000342220 OR4D10Q8NGI6 311 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 THOC3Q96J01 351 aaKnown RBP11.79□□□□□ -0.52
COL18A1-201ENST00000342220 TSPAN10Q9H1Z9 355 aaPredicted RBP11.79□□□□□ -0.52
COL18A1-201ENST00000342220 KCNMB2Q9Y691 235 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 DMXL2Q8TDJ6 3036 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 E9PI62 339 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 EIF1AYO14602 144 aaKnown RBP11.79□□□□□ -0.52
COL18A1-201ENST00000342220 SLC19A2O60779 497 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 SLC43A1O75387 559 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 AKR7A3O95154 331 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 NDUFB2O95178 105 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 WDPCPO95876 746 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 UMODP07911 640 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 OR10A3P58181 314 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 SKP2Q13309 424 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 FCN2Q15485 313 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF141Q15928 474 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 TMEM176BQ3YBM2 270 aaPredicted RBP11.79□□□□□ -0.52
COL18A1-201ENST00000342220 TP53I3Q53FA7 332 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 STPG1Q5TH74 334 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 METTL11BQ5VVY1 283 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 NIPAL3Q6P499 406 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 PLXDC2Q6UX71 529 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.79□□□□□ -0.52
COL18A1-201ENST00000342220 YRDCQ86U90 279 aaKnown RBP11.79□□□□□ -0.52
COL18A1-201ENST00000342220 BRIX1Q8TDN6 353 aaKnown RBP11.79□□□□□ -0.52
COL18A1-201ENST00000342220 NSMAFQ92636 917 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 SYT4Q9H2B2 425 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 P4HTMQ9NXG6 502 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 BABAM2Q9NXR7 383 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 TCFL5Q9UL49 500 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 PPIEQ9UNP9 301 aaKnown RBP11.79□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF318Q5VUA4 2279 aa11.79□□□□□ -0.52
COL18A1-201ENST00000342220 NTN3O00634 580 aaPredicted RBP11.78□□□□□ -0.52
COL18A1-201ENST00000342220 XKRYO14609 159 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 IFNGP01579 166 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 APOC3P02656 99 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 EIF4EP06730 217 aaKnown RBP11.78□□□□□ -0.52
COL18A1-201ENST00000342220 GAAP10253 952 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 NOVA1P51513 510 aaKnown RBP11.78□□□□□ -0.52
COL18A1-201ENST00000342220 FOXF1Q12946 379 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 GPR176Q14439 515 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 ETFDHQ16134 617 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 RBP7Q96R05 134 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 WDR77Q9BQA1 342 aaPredicted RBP11.78□□□□□ -0.52
COL18A1-201ENST00000342220 TWSG1Q9GZX9 223 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 HEXA-AS1Q9H8Q6 139 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 ENAMQ9NRM1 1142 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 MED29Q9NX70 200 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 FKBP7Q9Y680 259 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 POLEQ07864 2286 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 SGCEO43556 437 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 GALR2O43603 387 aaPredicted RBP11.78□□□□□ -0.52
COL18A1-201ENST00000342220 HK1P19367 917 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 PTBP1P26599 531 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL18A1-201ENST00000342220 MC2RQ01718 297 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 ZFP36L1Q07352 338 aaKnown RBP11.78□□□□□ -0.52
COL18A1-201ENST00000342220 CBFBQ13951 182 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 PDSS1Q5T2R2 415 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 ATRAIDQ6UW56 229 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 FAM198BQ6UWH4 519 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 MEPCEQ7L2J0 689 aaKnown RBP11.78□□□□□ -0.52
COL18A1-201ENST00000342220 STPG2Q8N412 459 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 SAMD12Q8N8I0 201 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 OR11H4Q8NGC9 324 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 SNX33Q8WV41 574 aa11.78□□□□□ -0.52
COL18A1-201ENST00000342220 GSX2Q9BZM3 304 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms