RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 DNAH3Q8TD57 4116 aa13.7□□□□□ -0.22
NECTIN1-202ENST00000340882 TLDC2A0PJX2 215 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 CEACAM18A8MTB9 384 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 RFXANKO14593 260 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 CLPXO76031 633 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 FARS2O95363 451 aaKnown RBP13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 PTHP01270 115 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 WNT2P09544 360 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 PGA4P0DJD7 388 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 PGA3P0DJD8 388 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 APLNRP35414 380 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 PROK1P58294 105 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 PLP2Q04941 152 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 RUSC1-AS1Q66K80 236 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 ULK3Q6PHR2 472 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 MNS1Q8NEH6 495 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 SLC47A1Q96FL8 570 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 SORT1Q99523 831 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 RHOXF2Q9BQY4 288 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 LRMDAQ9H2I8 198 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 AIG1Q9NVV5 245 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 TAS2R5Q9NYW4 299 aa13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 TET2Q6N021 2002 aaPredicted RBP13.69□□□□□ -0.22
NECTIN1-202ENST00000340882 A0A0B4J2E0 115 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 IGHV2-70DA0A0C4DH43 119 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 A0A1B0GX12 115 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 H0YL77 283 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 PIN1P1O15428 100 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 MGRN1O60291 552 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 TGDSO95455 350 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 MELTFP08582 738 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 STOMP27105 288 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 ETV4P43268 484 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 CDK5R2Q13319 367 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 FAM91A1Q658Y4 838 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 OR5J2Q8NH18 312 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 MCHR2Q969V1 340 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 ZNF566Q969W8 418 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 SLC25A44Q96H78 314 aaPredicted RBP13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 ZNF347Q96SE7 839 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 EPYCQ99645 322 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 PPCSQ9HAB8 311 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 TCF7L1Q9HCS4 588 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 BCL2L10Q9HD36 194 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 ASH2LQ9UBL3 628 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 ZDHHC8Q9ULC8 765 aa13.68□□□□□ -0.22
NECTIN1-202ENST00000340882 WDR91A4D1P6 747 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 C5orf49A4QMS7 147 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 ZNF205O95201 554 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 CDH12P55289 794 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 HSF2Q03933 536 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 OR1Q1Q15612 314 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 OGFOD2Q6N063 350 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 LRRN1Q6UXK5 716 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 Q6ZR03 302 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 DPPA2Q7Z7J5 298 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 AKR7LQ8NHP1 331 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 RAB40AQ8WXH6 277 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 SSBP3Q9BWW4 388 aaPredicted RBP13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 CACYBPQ9HB71 228 aaKnown RBP13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 CYSLTR2Q9NS75 346 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 IL20RAQ9UHF4 553 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 LRCH1Q9Y2L9 728 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 COL7A1Q02388 2944 aa13.67□□□□□ -0.22
NECTIN1-202ENST00000340882 C3orf80F5H4A9 247 aa13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 MYZAPP0CAP1 466 aa13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 ZNF32P17041 273 aa13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 PRKAR1BP31321 381 aa13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 CDAP32320 146 aa13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 RPL14P50914 215 aaKnown RBP13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 ABCE1P61221 599 aaKnown RBP13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 PPP1CBP62140 327 aa13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 HIST3H3Q16695 136 aa13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 PDCD4Q53EL6 469 aaKnown RBP13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 KPRPQ5T749 579 aaPredicted RBP13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 BTNL3Q6UXE8 466 aa13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 NUDCD3Q8IVD9 361 aa13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 ABHD4Q8TB40 342 aa13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 ITLN1Q8WWA0 313 aa13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 POFUT1Q9H488 388 aa13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 MEAF6Q9HAF1 191 aa13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 RAP2CQ9Y3L5 183 aa13.66□□□□□ -0.22
NECTIN1-202ENST00000340882 ENTPD5O75356 428 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 ZCCHC18P0CG32 403 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 LIPAP38571 399 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 MDH2P40926 338 aaKnown RBP13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 LRRC74AQ0VAA2 488 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 PSG7Q13046 419 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 RGNQ15493 299 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 MTX3Q5HYI7 312 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 FAM205BPQ63HN1 556 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 ZNF620Q6ZNG0 422 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 C10orf111Q8N326 155 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 HIPK4Q8NE63 616 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 BBS10Q8TAM1 723 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 NABP1Q96AH0 204 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 SAMD8Q96LT4 415 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 TMEM43Q9BTV4 400 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 NANOGQ9H9S0 305 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 A4GALTQ9NPC4 353 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms