RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 TRAP1Q12931 704 aaKnown RBP13.32□□□□□ -0.28
VAPA-201ENST00000340541 MESTQ5EB52 335 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 THEM4Q5T1C6 240 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 C1orf94Q6P1W5 598 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 FOXL2NBQ6ZUU3 175 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 FBXL14Q8N1E6 418 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 NUP37Q8NFH4 326 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 OR4C15Q8NGM1 316 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 KCNS3Q9BQ31 491 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 CA10Q9NS85 328 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 VNN3Q9NY84 501 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 IL20RAQ9UHF4 553 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 AURKCQ9UQB9 309 aa13.32□□□□□ -0.28
VAPA-201ENST00000340541 H7C1C5 153 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 GYG2O15488 501 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 OR10H3O60404 316 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 KRT36O76013 467 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 FARS2O95363 451 aaKnown RBP13.31□□□□□ -0.28
VAPA-201ENST00000340541 IGHV4-39P01824 125 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 MMP7P09237 267 aaPredicted RBP13.31□□□□□ -0.28
VAPA-201ENST00000340541 NR2C1P13056 603 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 ZNF35P13682 527 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 FPR3P25089 353 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 GSSP48637 474 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 LCN6P62502 163 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 BNIP1Q12981 228 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 RAB39AQ14964 217 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 ADIPOQQ15848 244 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 SWI5Q1ZZU3 235 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 DNAL1Q4LDG9 190 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 ZNF770Q6IQ21 691 aaPredicted RBP13.31□□□□□ -0.28
VAPA-201ENST00000340541 PGBD2Q6P3X8 592 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 ADGRG5Q8IZF4 528 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 IL17RDQ8NFM7 739 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 OR4F15Q8NGB8 312 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 FNDC8Q8TC99 324 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 NSMAFQ92636 917 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 RASD2Q96D21 266 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 RBP7Q96R05 134 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 BTBD10Q9BSF8 475 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 CACNG6Q9BXT2 260 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 REG4Q9BYZ8 158 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 SIAEQ9HAT2 523 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 BARX1Q9HBU1 254 aaPredicted RBP13.31□□□□□ -0.28
VAPA-201ENST00000340541 KRCC1Q9NPI7 259 aaPredicted RBP13.31□□□□□ -0.28
VAPA-201ENST00000340541 GRHPRQ9UBQ7 328 aa13.31□□□□□ -0.28
VAPA-201ENST00000340541 GDF2Q9UK05 429 aaPredicted RBP13.31□□□□□ -0.28
VAPA-201ENST00000340541 TEX13CA0A0J9YWL9 993 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 SLC22A23A1A5C7 686 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 TLX2O43763 284 aaPredicted RBP13.3□□□□□ -0.28
VAPA-201ENST00000340541 MGRN1O60291 552 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 ENTPD5O75356 428 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 RAB36O95755 333 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 TXNDC12O95881 172 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 SERPINA5P05154 406 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 NPR2P20594 1047 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 SDHAP31040 664 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 CHRNB3Q05901 458 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 KRTAP1-1Q07627 177 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 GPR139Q6DWJ6 353 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 SMARCD3Q6STE5 483 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 DPY19L2P2Q6ZN68 376 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 CXXC5Q7LFL8 322 aaKnown RBP13.3□□□□□ -0.28
VAPA-201ENST00000340541 SLC16A14Q7RTX9 510 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 DPPA2Q7Z7J5 298 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 POP5Q969H6 163 aaKnown RBP13.3□□□□□ -0.28
VAPA-201ENST00000340541 ZNF570Q96NI8 536 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 TRIM15Q9C019 465 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 ZNF442Q9H7R0 627 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 FBXL3Q9UKT7 428 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 TMCC3Q9ULS5 477 aa13.3□□□□□ -0.28
VAPA-201ENST00000340541 PRSS37A4D1T9 235 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 AQP12BA6NM10 295 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 RNF223E7ERA6 249 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 H7C417 338 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 TNFRSF11BO00300 401 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 IMPA2O14732 288 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 AHCYL1O43865 530 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 TP53P04637 393 aaPredicted RBP13.29□□□□□ -0.28
VAPA-201ENST00000340541 OR4A8P0C604 315 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 NR4A1P22736 598 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 THBS4P35443 961 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 SERPINF1P36955 418 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 PPP1R8Q12972 351 aaKnown RBP13.29□□□□□ -0.28
VAPA-201ENST00000340541 TSPAN31Q12999 210 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 KRR1Q13601 381 aaKnown RBP13.29□□□□□ -0.28
VAPA-201ENST00000340541 MSMPQ1L6U9 139 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 RFX4Q33E94 735 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 SLC36A2Q495M3 483 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 FAM98BQ52LJ0 330 aaKnown RBP13.29□□□□□ -0.28
VAPA-201ENST00000340541 FAM27BQ5VT28 67 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 OR2T5Q6IEZ7 315 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 DNM1P46Q6ZS02 220 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 PTCHD4Q6ZW05 846 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 AQP12AQ8IXF9 295 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 LRRC18Q8N456 261 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 OR9Q2Q8NGE9 314 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 OR2T29Q8NH02 315 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 FANK1Q8TC84 345 aa13.29□□□□□ -0.28
VAPA-201ENST00000340541 LRGUKQ96M69 825 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms