RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 ZNF582Q96NG8 517 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 MEAF6Q9HAF1 191 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 FBXO8Q9NRD0 319 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 RHCGQ9UBD6 479 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ST3GAL6Q9Y274 331 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TMA7Q9Y2S6 64 aaKnown RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TRAV36DV7A0A075B6V5 113 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TSPAN11A1L157 253 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 A1L4Q6 167 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 CXorf65A6NEN9 183 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 METTL15A6NJ78 407 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SULT2B1O00204 365 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TBX10O75333 385 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TFP02787 698 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 COX6CP09669 75 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SP9P0CG40 484 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 G6PCP35575 357 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 GSK3BP49841 420 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 CCR5P51681 352 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ACSM3Q53FZ2 586 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM65Q6PI78 240 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 FJX1Q86VR8 437 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 RPS19BP1Q86WX3 136 aaKnown RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF383Q8NA42 475 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SLCO4A1Q96BD0 722 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF486Q96H40 463 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 KREMEN1Q96MU8 473 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 NKX3-1Q99801 234 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 CITED1Q99966 193 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ATG101Q9BSB4 218 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 GATA5Q9BWX5 397 aaPredicted RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 RNF38Q9H0F5 515 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 CLEC5AQ9NY25 188 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 TEX264Q9Y6I9 313 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 COL4A1P02462 1669 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 B4E171 279 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 LIPFP07098 398 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 HLA-DOBP13765 273 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ADRB3P13945 408 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 GJA4P35212 333 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 MTNR1BP49286 362 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF542PQ5EBM4 170 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 LRFN4Q6PJG9 635 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ASPGQ86U10 573 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 YIPF7Q8N8F6 280 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 PP6455Q8WZ26 134 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 SCNM1Q9BWG6 230 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 WDR61Q9GZS3 305 aaKnown RBP3.04□□□□□ -1.92
CSMD3-202ENST00000339701 ZDHHC11Q9H8X9 412 aa3.04□□□□□ -1.92
CSMD3-202ENST00000339701 FXYD6-FXYD2A0A087WZ82 144 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM129A0AVI4 362 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OPN1MWP04001 364 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OPN1MW2P0DN77 364 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OPN1MW3P0DN78 364 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PBX1P40424 430 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 HLXQ14774 488 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PNLIPRP3Q17RR3 467 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 C18orf21Q32NC0 220 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SLC30A6Q6NXT4 461 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 BEND4Q6ZU67 534 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 DCXRQ7Z4W1 244 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 MFSD4AQ8N468 514 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OR1L6Q8NGR2 347 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OR9A1PQ8NGU1 263 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 FGF14Q92915 247 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PTPN18Q99952 460 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 NTMT1Q9BV86 223 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 FXYD6Q9H0Q3 95 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF331Q9NQX6 463 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 MIOXQ9UGB7 285 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 IL20RAQ9UHF4 553 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OARD1Q9Y530 152 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 DUXBA0A1W2PPF3 345 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 NPIPB15A6NHN6 443 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SERPINE3A8MV23 424 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ST8SIA3O43173 380 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 PF4P02776 101 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SOD3P08294 240 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 S100A11P31949 105 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 CSNK1DP48730 415 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SPCS3P61009 180 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 GRB2P62993 217 aaKnown RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SIX1Q15475 284 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OR4A47Q6IF82 309 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 MRPL52Q86TS9 123 aaKnown RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 ZFP82Q8N141 532 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SYS1Q8N2H4 156 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 HSD17B11Q8NBQ5 300 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 KLHDC9Q8NEP7 349 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OR52R1Q8NGF1 315 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 OR4A4PQ8NGN8 299 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 JOSD2Q8TAC2 188 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 MBOAT4Q96T53 435 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 DHRS9Q9BPW9 319 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 TMPRSS13Q9BYE2 586 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 UBQLN3Q9H347 655 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 CGGBP1Q9UFW8 167 aaPredicted RBP3.03□□□□□ -1.92
CSMD3-202ENST00000339701 TCFL5Q9UL49 500 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 SHANK1Q9Y566 2161 aa3.03□□□□□ -1.92
CSMD3-202ENST00000339701 C2CD4BA6NLJ0 364 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms