RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 TNK1Q13470 666 aa11.29□□□□□ -0.6
FN1-202ENST00000336916 CTU2Q2VPK5 515 aaKnown RBP11.29□□□□□ -0.6
FN1-202ENST00000336916 PRAMEF20Q5VT98 475 aa11.29□□□□□ -0.6
FN1-202ENST00000336916 PTRH1Q86Y79 214 aaKnown RBP11.29□□□□□ -0.6
FN1-202ENST00000336916 KDF1Q8NAX2 398 aaPredicted RBP11.29□□□□□ -0.6
FN1-202ENST00000336916 CRYAAP02489 173 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 SRMP19623 302 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 TEAD1P28347 426 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 SHHQ15465 462 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 GLYR1Q49A26 553 aaPredicted RBP11.28□□□□□ -0.6
FN1-202ENST00000336916 ZNF813Q6ZN06 617 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 MAFAQ8NHW3 353 aaPredicted RBP11.28□□□□□ -0.6
FN1-202ENST00000336916 ARRDC2Q8TBH0 407 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 CHRDL1Q9BU40 450 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 MED18Q9BUE0 208 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 ANXA7P20073 488 aaKnown RBP11.28□□□□□ -0.6
FN1-202ENST00000336916 LIM2P55344 173 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 CST9Q5W186 159 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 CST9LP1Q5W188 147 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 FCRLBQ6BAA4 426 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 CCDC74AQ96AQ1 378 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 LAT2Q9GZY6 243 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 FAM96BQ9Y3D0 163 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 BET1O15155 118 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 ALPLP05186 524 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 PIGAP37287 484 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 DUSP8Q13202 625 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 C18orf21Q32NC0 220 aaPredicted RBP11.28□□□□□ -0.6
FN1-202ENST00000336916 H2BFWTQ7Z2G1 175 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 C15orf54Q8N8G6 183 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 MRPS28Q9Y2Q9 187 aaKnown RBP11.28□□□□□ -0.6
FN1-202ENST00000336916 OR7A17O14581 309 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 APOC3P02656 99 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 HES1Q14469 280 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 MFSD12Q6NUT3 480 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 Q8IYB0 196 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 TMEM106AQ96A25 262 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 NOX3Q9HBY0 568 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 DLL4Q9NR61 685 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 UGT2A1Q9Y4X1 527 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 AGAP14A8MT82 685 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 FAM171A2A8MVW0 826 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 MBP02144 154 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 CLEC3BP05452 202 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 BLVRBP30043 206 aaPredicted RBP11.28□□□□□ -0.6
FN1-202ENST00000336916 NPBWR1P48145 328 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 ACSM1Q08AH1 577 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 SELPLGQ14242 412 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 IGFN1Q86VF2 1251 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 ARRDC5A6NEK1 342 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 PLA1AQ53H76 456 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 PLXDC2Q6UX71 529 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 IDO2Q6ZQW0 420 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 CPNE4Q96A23 557 aaPredicted RBP11.28□□□□□ -0.6
FN1-202ENST00000336916 CIB3Q96Q77 187 aaPredicted RBP11.28□□□□□ -0.6
FN1-202ENST00000336916 NIPSNAP3BQ9BS92 247 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 SAMD10Q9BYL1 202 aa11.28□□□□□ -0.6
FN1-202ENST00000336916 SLC2A1P11166 492 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 HLA-DOBP13765 273 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 CD53P19397 219 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 RPL27P61353 136 aaKnown RBP11.27□□□□□ -0.6
FN1-202ENST00000336916 SLC15A4Q8N697 577 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 CCL26Q9Y258 94 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 MED16Q9Y2X0 877 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 ADAMTSL1Q8N6G6 1762 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 TMEM72A0PK05 275 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 DRD5P21918 477 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 CAPZBP47756 277 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 P2RY14Q15391 338 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 OR52W1Q6IF63 320 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 ZFP90Q8TF47 636 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 HES7Q9BYE0 225 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 GNG13Q9P2W3 67 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 CEPT1Q9Y6K0 416 aa11.27□□□□□ -0.6
FN1-202ENST00000336916 CXCL10P02778 98 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 DOC2BQ14184 412 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 ZNF718Q3SXZ3 478 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 FAM162BQ5T6X4 162 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 H1FXQ92522 213 aaKnown RBP11.27□□□□□ -0.61
FN1-202ENST00000336916 F13BP05160 661 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 BAHD1Q8TBE0 780 aaPredicted RBP11.27□□□□□ -0.61
FN1-202ENST00000336916 SERTAD4Q9NUC0 356 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 CRYM-AS1A6NIL9 109 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 EPHA5P54756 1037 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 OR6K3Q8NGY3 331 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 DEDD2Q8WXF8 326 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 TM4SF18Q96CE8 201 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 ELF4Q99607 663 aaPredicted RBP11.27□□□□□ -0.61
FN1-202ENST00000336916 SH2D7A6NKC9 451 aaPredicted RBP11.27□□□□□ -0.61
FN1-202ENST00000336916 PMS2P2O95744 297 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 PPIAP62937 165 aaKnown RBP11.27□□□□□ -0.61
FN1-202ENST00000336916 DUSP13Q9UII6 198 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 SHANK1Q9Y566 2161 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 NUDT19A8MXV4 375 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 ARHGAP33O14559 1287 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 CLDN1O95832 211 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 LGI1O95970 557 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 PSMB3P49720 205 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 FZD2Q14332 565 aa11.27□□□□□ -0.61
FN1-202ENST00000336916 NKAIN2Q5VXU1 208 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms