RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 ZDHHC21Q8IVQ6 265 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 SVOPLQ8N434 492 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 ARIH2OSQ8N7S6 290 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 ALG12Q9BV10 488 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 SMURF2Q9HAU4 748 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 TMEM5Q9Y2B1 443 aa12.87□□□□□ -0.35
KATNA1-201ENST00000335643 CHD3Q12873 2000 aaKnown RBP12.87□□□□□ -0.35
KATNA1-201ENST00000335643 TEX13CA0A0J9YWL9 993 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 FARS2O95363 451 aaKnown RBP12.86□□□□□ -0.35
KATNA1-201ENST00000335643 ITGA2P17301 1181 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 NPR2P20594 1047 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 CHRNB3Q05901 458 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 OTPQ5XKR4 325 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 CPEB3Q8NE35 698 aaKnown RBP12.86□□□□□ -0.35
KATNA1-201ENST00000335643 IL17RDQ8NFM7 739 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 BCAS4Q8TDM0 211 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 FOXN4Q96NZ1 517 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 DENND2DQ9H6A0 471 aaPredicted RBP12.86□□□□□ -0.35
KATNA1-201ENST00000335643 SIAEQ9HAT2 523 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 BARX1Q9HBU1 254 aaPredicted RBP12.86□□□□□ -0.35
KATNA1-201ENST00000335643 NRIP3Q9NQ35 241 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 STX18Q9P2W9 335 aaKnown RBP12.86□□□□□ -0.35
KATNA1-201ENST00000335643 FN1P02751 2386 aaKnown RBP12.86□□□□□ -0.35
KATNA1-201ENST00000335643 CSPG4Q6UVK1 2322 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 A0A096LNT2 108 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 B9A039 149 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 NDUFB2O95178 105 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 HEXAP06865 529 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 HOXB4P17483 251 aaPredicted RBP12.86□□□□□ -0.35
KATNA1-201ENST00000335643 SNRPD2P62316 118 aaKnown RBP12.86□□□□□ -0.35
KATNA1-201ENST00000335643 SGCAQ16586 387 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 SLC36A2Q495M3 483 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 THEM4Q5T1C6 240 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 LCN8Q6JVE9 175 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 FOXL2NBQ6ZUU3 175 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 PTCHD4Q6ZW05 846 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 LRP11Q86VZ4 500 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 SLC30A7Q8NEW0 376 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 OR10H5Q8NGA6 315 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 MCUR1Q96AQ8 359 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 ZNF570Q96NI8 536 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 GPX7Q96SL4 187 aaPredicted RBP12.86□□□□□ -0.35
KATNA1-201ENST00000335643 DOK1Q99704 481 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 REG4Q9BYZ8 158 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 MRPL37Q9BZE1 423 aaKnown RBP12.86□□□□□ -0.35
KATNA1-201ENST00000335643 RNF121Q9H920 327 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 MYEF2Q9P2K5 600 aaKnown RBP12.86□□□□□ -0.35
KATNA1-201ENST00000335643 GRHPRQ9UBQ7 328 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 FZR1Q9UM11 496 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 PMF1-BGLAPU3KQ54 211 aa12.86□□□□□ -0.35
KATNA1-201ENST00000335643 RTTNQ86VV8 2226 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 SLC22A23A1A5C7 686 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 UNC119BA6NIH7 251 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 A6NIZ1 184 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 UBOX5O94941 541 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 ZNF32P17041 273 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 APEX1P27695 318 aaKnown RBP12.85□□□□□ -0.35
KATNA1-201ENST00000335643 LAP3P28838 519 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 MAGEA2P43356 314 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 EFNA4P52798 201 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 RIPPLY3P57055 190 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 RAP1BP61224 184 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 ERVS71-1P61550 626 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 RAP1AP62834 184 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 PPP1R8Q12972 351 aaKnown RBP12.85□□□□□ -0.35
KATNA1-201ENST00000335643 TRIM25Q14258 630 aaKnown RBP12.85□□□□□ -0.35
KATNA1-201ENST00000335643 PABPC1L2AQ5JQF8 200 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 FAM205BPQ63HN1 556 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 UGT2A3Q6UWM9 527 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 TRPM8Q7Z2W7 1104 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 CCDC124Q96CT7 223 aaKnown RBP12.85□□□□□ -0.35
KATNA1-201ENST00000335643 RBP7Q96R05 134 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 VRK1Q99986 396 aaPredicted RBP12.85□□□□□ -0.35
KATNA1-201ENST00000335643 OR51B6Q9H340 312 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 VNN3Q9NY84 501 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 AURKCQ9UQB9 309 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 LYVE1Q9Y5Y7 322 aa12.85□□□□□ -0.35
KATNA1-201ENST00000335643 A0A1W2PPL8 197 aa12.84□□□□□ -0.35
KATNA1-201ENST00000335643 PRSS37A4D1T9 235 aa12.84□□□□□ -0.35
KATNA1-201ENST00000335643 OR10H3O60404 316 aa12.84□□□□□ -0.35
KATNA1-201ENST00000335643 F12P00748 615 aaPredicted RBP12.84□□□□□ -0.35
KATNA1-201ENST00000335643 FAM157BP0CG42 384 aa12.84□□□□□ -0.35
KATNA1-201ENST00000335643 CTLA4P16410 223 aa12.84□□□□□ -0.35
KATNA1-201ENST00000335643 SDHAP31040 664 aa12.84□□□□□ -0.35
KATNA1-201ENST00000335643 KRR1Q13601 381 aaKnown RBP12.84□□□□□ -0.35
KATNA1-201ENST00000335643 ENDOGQ14249 297 aaKnown RBP12.84□□□□□ -0.35
KATNA1-201ENST00000335643 FAM27BQ5VT28 67 aa12.84□□□□□ -0.35
KATNA1-201ENST00000335643 TMEM53Q6P2H8 277 aa12.84□□□□□ -0.35
KATNA1-201ENST00000335643 DHFR2Q86XF0 187 aa12.84□□□□□ -0.35
KATNA1-201ENST00000335643 ARHGAP24Q8N264 748 aa12.84□□□□□ -0.35
KATNA1-201ENST00000335643 OR9Q2Q8NGE9 314 aa12.84□□□□□ -0.35
KATNA1-201ENST00000335643 AKR7LQ8NHP1 331 aa12.84□□□□□ -0.35
KATNA1-201ENST00000335643 MRPL24Q96A35 216 aaKnown RBP12.84□□□□□ -0.35
KATNA1-201ENST00000335643 BTBD10Q9BSF8 475 aa12.84□□□□□ -0.35
KATNA1-201ENST00000335643 C1orf21Q9H246 121 aa12.84□□□□□ -0.35
KATNA1-201ENST00000335643 IER3IP1Q9Y5U9 82 aa12.84□□□□□ -0.35
KATNA1-201ENST00000335643 LOC100509620A0A075B734 347 aa12.83□□□□□ -0.36
KATNA1-201ENST00000335643 SOCS2O14508 198 aa12.83□□□□□ -0.36
KATNA1-201ENST00000335643 ACOT8O14734 319 aa12.83□□□□□ -0.36
KATNA1-201ENST00000335643 PPP1R3DO95685 299 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms