RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 Q6ZPB1 254 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 GPR26Q8NDV2 337 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 CT45A3Q8NHU0 189 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 SLC7A6Q92536 515 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 FAM163AQ96GL9 167 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 PARLQ9H300 379 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 DUXBA0A1W2PPF3 345 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 DHRS7CA6NNS2 312 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 J3KT08 172 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 TRGC1P0CF51 173 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 CT45A10P0DMU9 189 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 NID1P14543 1247 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 CD247P20963 164 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 CSNK1DP48730 415 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 AGTR2P50052 363 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF66Q6ZN08 573 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 SNX29P2Q8IUI4 249 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 PHYKPLQ8IUZ5 450 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR5R1Q8NH85 324 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZFP90Q8TF47 636 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 TBX15Q96SF7 602 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 NKX3-1Q99801 234 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZBP1Q9H171 429 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 THYN1Q9P016 225 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 DNAL4O96015 105 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 SMPD1P17405 629 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 KIR3DL1P43629 444 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 MSS51Q4VC12 460 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 DNLZQ5SXM8 178 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 TRAT1Q6PIZ9 186 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 RNF130Q86XS8 419 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR5D14Q8NGL3 314 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 BTNL2Q9UIR0 455 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 YIF1AO95070 293 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 ARSBP15848 533 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 TBPP20226 339 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 HTR1FP30939 366 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 SNRPNP63162 240 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 RNLSQ5VYX0 342 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 NCR3LG1Q68D85 454 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 TMEM220Q6QAJ8 160 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 RASL11AQ6T310 242 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 SERPINA11Q86U17 422 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 SPPL3Q8TCT6 385 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 ORAOV1Q8WV07 137 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 BORCS6Q96GS4 357 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 AAASQ9NRG9 546 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 STYXL1Q9Y6J8 313 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 EXPH5Q8NEV8 1989 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 LTBP3Q9NS15 1303 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 AOC2O75106 756 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 NRASP01111 189 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 HRASP01112 189 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 KRASP01116 189 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 OPN1SWP03999 348 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 SOD2P04179 222 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 ITGA5P08648 1049 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 EVI2AP22794 236 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 CPT1AP50416 773 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 DUOXA2Q1HG44 320 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 KIAA0895LQ68EN5 471 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 PTRH1Q86Y79 214 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 TCEAL8Q8IYN2 117 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 TMEM43Q9BTV4 400 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 MRPL20Q9BYC9 149 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 POLR2J3Q9H1A7 115 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 FER1L5A0AVI2 2057 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 C7orf71A4D174 169 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 FAM181BA6NEQ2 426 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 GCATO75600 419 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 FOLR1P15328 257 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 FPR1P21462 350 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 SP3Q02447 781 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 SEMA3BQ13214 749 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 CATSPEREQ5SY80 951 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 GJB7Q6PEY0 223 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 ATOH7Q8N100 152 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 EDAQ92838 391 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 ISOC2Q96AB3 205 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 DUSP21Q9H596 190 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 OXSMQ9NWU1 459 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 BARHL2Q9NY43 387 aa5.62□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR5AL1P0C617 328 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 FXYD6P3P58550 94 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 FDX2Q6P4F2 183 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 DYNLRB2Q8TF09 96 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 WNT5BQ9H1J7 359 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 NAA60Q9H7X0 242 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 TPRP12270 2363 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR4F21O95013 312 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 CTXN2P0C2S0 81 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 WNT5AP41221 380 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF92Q03936 586 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 PYCR3Q53H96 274 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 RHBDF2Q6PJF5 856 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 AGTRAPQ6RW13 159 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 SELENOHQ8IZQ5 122 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 LGI3Q8N145 548 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 ANKK1Q8NFD2 765 aa5.61□□□□□ -1.51
CDC42BPA-201ENST00000334218 MRAP2Q96G30 205 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms