RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 AADACL4Q5VUY2 407 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 C22orf34Q6ZV56 151 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 CXXC5Q7LFL8 322 aaKnown RBP14.54□□□□□ -0.08
SHOX-201ENST00000334060 OR6N1Q8NGY5 312 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 APH1AQ96BI3 265 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 GLTPQ9NZD2 209 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 VSX1Q9NZR4 365 aaPredicted RBP14.54□□□□□ -0.08
SHOX-201ENST00000334060 UGT2A1Q9Y4X1 527 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 IGLV1-36A0A0B4J1U3 117 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 A0A1W2PR80 420 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 BOLA2-SMG1P6H3BVE0 249 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 XKRYO14609 159 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 MAGEB3O15480 346 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 ZG16O60844 167 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 WNT11O96014 354 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 IGHG1P01857 330 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 ITGA5P08648 1049 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 MRPL3P09001 348 aaKnown RBP14.54□□□□□ -0.08
SHOX-201ENST00000334060 SLC2A5P22732 501 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 PTGER4P35408 488 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 CSNK1A1P48729 337 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 MVKQ03426 396 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 CEACAM16Q2WEN9 425 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 LINC01590Q5TEZ4 76 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 GPR139Q6DWJ6 353 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 ZNF100Q8IYN0 542 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 UBE2J2Q8N2K1 259 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 RFLNBQ8N5W9 214 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 RHOXF1Q8NHV9 184 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 ZMYND19Q96E35 227 aaPredicted RBP14.54□□□□□ -0.08
SHOX-201ENST00000334060 ZNF582Q96NG8 517 aaPredicted RBP14.54□□□□□ -0.08
SHOX-201ENST00000334060 SLCO5A1Q9H2Y9 848 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 IMPAD1Q9NX62 359 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 EMC3Q9P0I2 261 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 CACNA1CQ13936 2221 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 NCOA6Q14686 2063 aaPredicted RBP14.53□□□□□ -0.08
SHOX-201ENST00000334060 NKX2-6A6NCS4 301 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 NPIPB13A6NJU9 1138 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 RIIAD1A6NNX1 92 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 NPIPB4C9JG80 1138 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 H0YAE9 185 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 LYZL6O75951 148 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 IL18BPO95998 194 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 PATE4P0C8F1 98 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 OR3A2P47893 321 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 CDC42P60953 191 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 PIGFQ07326 219 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 C16orf87Q6PH81 154 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 FGFBP3Q8TAT2 258 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 TTTY10Q9BZA0 68 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 WDR76Q9H967 626 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 B9D1Q9UPM9 204 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 RCE1Q9Y256 329 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 A0A096LPE4 126 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 A0A1W2PPZ6 126 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 EEF1E1-BLOC1S5C9J1V9 151 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 GPR171O14626 319 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 EEF1E1O43324 174 aaKnown RBP14.53□□□□□ -0.08
SHOX-201ENST00000334060 TFP02787 698 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 ZNF3P17036 446 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 IGHV1-2P23083 117 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 MYF6P23409 242 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 TUBA1BP68363 451 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 CDK5R2Q13319 367 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 TTC23Q5W5X9 447 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 SLC25A47Q6Q0C1 308 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 TUBA1AQ71U36 451 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 SLC38A2Q96QD8 506 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 RBM24Q9BX46 236 aaKnown RBP14.53□□□□□ -0.08
SHOX-201ENST00000334060 ULBP2Q9BZM5 246 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 NELFAQ9H3P2 528 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 GPR35Q9HC97 309 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 EMC7Q9NPA0 242 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 MRPL22Q9NWU5 206 aaKnown RBP14.53□□□□□ -0.08
SHOX-201ENST00000334060 EMC9Q9Y3B6 208 aa14.53□□□□□ -0.08
SHOX-201ENST00000334060 FAM90A27PA6NNH2 459 aa14.52□□□□□ -0.09
SHOX-201ENST00000334060 PRR23D1E9PI22 279 aaPredicted RBP14.52□□□□□ -0.09
SHOX-201ENST00000334060 SLC43A1O75387 559 aa14.52□□□□□ -0.09
SHOX-201ENST00000334060 SULT1C4O75897 302 aa14.52□□□□□ -0.09
SHOX-201ENST00000334060 INHBBP09529 407 aa14.52□□□□□ -0.09
SHOX-201ENST00000334060 PRR23D2P0DMB1 279 aaPredicted RBP14.52□□□□□ -0.09
SHOX-201ENST00000334060 B4GALT1P15291 398 aa14.52□□□□□ -0.09
SHOX-201ENST00000334060 CTSSP25774 331 aa14.52□□□□□ -0.09
SHOX-201ENST00000334060 CENPAP49450 140 aa14.52□□□□□ -0.09
SHOX-201ENST00000334060 RIPPLY2Q5TAB7 128 aa14.52□□□□□ -0.09
SHOX-201ENST00000334060 CLVS1Q8IUQ0 354 aaPredicted RBP14.52□□□□□ -0.09
SHOX-201ENST00000334060 C8orf59Q8N0T1 100 aaPredicted RBP14.52□□□□□ -0.09
SHOX-201ENST00000334060 CENPSQ8N2Z9 138 aa14.52□□□□□ -0.09
SHOX-201ENST00000334060 OR6K6Q8NGW6 343 aa14.52□□□□□ -0.09
SHOX-201ENST00000334060 OR6K3Q8NGY3 331 aa14.52□□□□□ -0.09
SHOX-201ENST00000334060 RND1Q92730 232 aa14.52□□□□□ -0.09
SHOX-201ENST00000334060 C12orf43Q96C57 262 aaKnown RBP14.52□□□□□ -0.09
SHOX-201ENST00000334060 BAIAP2Q9UQB8 552 aa14.52□□□□□ -0.09
SHOX-201ENST00000334060 A0A1W2PPL8 197 aa14.51□□□□□ -0.09
SHOX-201ENST00000334060 IDH3BO43837 385 aa14.51□□□□□ -0.09
SHOX-201ENST00000334060 SELENOFO60613 162 aa14.51□□□□□ -0.09
SHOX-201ENST00000334060 HMGN1P05114 100 aa14.51□□□□□ -0.09
SHOX-201ENST00000334060 NAA10P41227 235 aaPredicted RBP14.51□□□□□ -0.09
SHOX-201ENST00000334060 TMBIM6P55061 237 aa14.51□□□□□ -0.09
SHOX-201ENST00000334060 FAM27E3Q08E93 113 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms