RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 SLC19A3Q9BZV2 496 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 EVA1AQ9H8M9 152 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 UBQLN4Q9NRR5 601 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 ZNF230Q9UIE0 474 aaPredicted RBP11.12□□□□□ -0.63
VPS33B-201ENST00000333371 GMEB2Q9UKD1 530 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 CA14Q9ULX7 337 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 PHF3Q92576 2039 aaKnown RBP11.12□□□□□ -0.63
VPS33B-201ENST00000333371 ARID1AO14497 2285 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 FER1L5A0AVI2 2057 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 M0QYG6 137 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 SCDO00767 359 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 HCRTR2O43614 444 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 NUDT14O95848 222 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 IL5P05113 134 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 HOXD4P09016 255 aaPredicted RBP11.12□□□□□ -0.63
VPS33B-201ENST00000333371 IFI6P09912 130 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 LIPCP11150 499 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 OR1D4P47884 311 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 MRPS10P82664 201 aaKnown RBP11.12□□□□□ -0.63
VPS33B-201ENST00000333371 SORDQ00796 357 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 MFGE8Q08431 387 aaPredicted RBP11.12□□□□□ -0.63
VPS33B-201ENST00000333371 SMAD4Q13485 552 aaKnown RBP11.12□□□□□ -0.63
VPS33B-201ENST00000333371 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.12□□□□□ -0.63
VPS33B-201ENST00000333371 C4orf46Q504U0 113 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 EEF1A1P5Q5VTE0 462 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 OR10K2Q6IF99 312 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 RGS7BPQ6MZT1 257 aaPredicted RBP11.12□□□□□ -0.63
VPS33B-201ENST00000333371 ANKRD16Q6P6B7 361 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 KCTD20Q7Z5Y7 419 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 ZBTB44Q8NCP5 570 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 OR2AK2Q8NG84 335 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 DUSP19Q8WTR2 217 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 PTPMT1Q8WUK0 201 aaPredicted RBP11.12□□□□□ -0.63
VPS33B-201ENST00000333371 TNFAIP8L1Q8WVP5 186 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 ATG5Q9H1Y0 275 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 LMAN1LQ9HAT1 526 aa11.12□□□□□ -0.63
VPS33B-201ENST00000333371 CGGBP1Q9UFW8 167 aaPredicted RBP11.12□□□□□ -0.63
VPS33B-201ENST00000333371 MFSD2BA6NFX1 497 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 SNRPGP15A8MWD9 76 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 SPDEFO95238 335 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 MPZL1O95297 269 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 PNMTP11086 282 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 DLX5P56178 289 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 FOXL2P58012 376 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 ZNF117Q03924 483 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 ARHGAP40Q5TG30 622 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 TMEM81Q6P7N7 255 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 C11orf88Q6PI97 169 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 C17orf107Q6ZR85 190 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 DNM1P46Q6ZS02 220 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 MARCH3Q86UD3 253 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 PRSS58Q8IYP2 241 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 KDM8Q8N371 416 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 RELL2Q8NC24 303 aaPredicted RBP11.11□□□□□ -0.63
VPS33B-201ENST00000333371 ZNF417Q8TAU3 575 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 MCHR2Q969V1 340 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 PNPLA2Q96AD5 504 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 FAM3DQ96BQ1 224 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 PHF7Q9BWX1 381 aaPredicted RBP11.11□□□□□ -0.63
VPS33B-201ENST00000333371 UBE2QL1A1L167 161 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 RENP00797 406 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 SPARCP09486 303 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 TDGQ13569 410 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 TMED4Q7Z7H5 227 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 SDR16C5Q8N3Y7 309 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 OR51A2Q8NGJ7 313 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 OR6M1Q8NGM8 313 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 DCBLD2Q96PD2 775 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 LRRC61Q9BV99 259 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 EXO5Q9H790 373 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 RABL2AQ9UBK7 228 aaPredicted RBP11.11□□□□□ -0.63
VPS33B-201ENST00000333371 FBXL2Q9UKC9 423 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 FBXO4Q9UKT5 387 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 CDV3Q9UKY7 258 aaKnown RBP11.11□□□□□ -0.63
VPS33B-201ENST00000333371 RABL2BQ9UNT1 228 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 TMEM212A6NML5 194 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 F5H5P2 479 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 ZNF217O75362 1048 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 RP2O75695 350 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 LDOC1O95751 146 aaPredicted RBP11.11□□□□□ -0.63
VPS33B-201ENST00000333371 CSN2P05814 226 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 GUSBP08236 651 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 MECP2P51608 486 aaKnown RBP11.11□□□□□ -0.63
VPS33B-201ENST00000333371 EFNA3P52797 238 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 SLC37A1P57057 533 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 ZNF627Q7L945 461 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 OTOSQ8NHW6 89 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 TINAGL1Q9GZM7 467 aaPredicted RBP11.11□□□□□ -0.63
VPS33B-201ENST00000333371 EXOSC3Q9NQT5 275 aaKnown RBP11.11□□□□□ -0.63
VPS33B-201ENST00000333371 SOHLH2Q9NX45 425 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 KIF25Q9UIL4 384 aa11.11□□□□□ -0.63
VPS33B-201ENST00000333371 ABCA7Q8IZY2 2146 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 VPS13AQ96RL7 3174 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 IGHV5-51A0A0C4DH38 117 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 LMX1BO60663 402 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 SLC16A7O60669 478 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 ALOX12BO75342 701 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 NSA2O95478 260 aaKnown RBP11.1□□□□□ -0.63
VPS33B-201ENST00000333371 TXNDC12O95881 172 aa11.1□□□□□ -0.63
VPS33B-201ENST00000333371 GABRA1P14867 456 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms