RNA–Protein interactions for RNA: ENST00000331471.8

BEST3-203, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,506 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-203ENST00000331471 HMGN4O00479 90 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 FFAR1O14842 300 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 SMAD9O15198 467 aaKnown RBP7.8□□□□□ -1.16
BEST3-203ENST00000331471 CYTIPO60759 359 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 UPK1BO75841 260 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 AK1P00568 194 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 BCHEP06276 602 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 H1F0P07305 194 aaKnown RBP7.8□□□□□ -1.16
BEST3-203ENST00000331471 DANCRP0C864 163 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 TNFRSF1BP20333 461 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 GADD45AP24522 165 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 ACVR1BP36896 505 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 RGS6P49758 472 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 KHKP50053 298 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 CDH11P55287 796 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 RPS26P62854 115 aaKnown RBP7.8□□□□□ -1.16
BEST3-203ENST00000331471 CSNK2A1P68400 391 aaPredicted RBP7.8□□□□□ -1.16
BEST3-203ENST00000331471 DUSP7Q16829 419 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 SLC25A53Q5H9E4 307 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 HEPHL1Q6MZM0 1159 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 C6orf120Q7Z4R8 191 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 ATG4DQ86TL0 474 aaPredicted RBP7.8□□□□□ -1.16
BEST3-203ENST00000331471 KRT73Q86Y46 540 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 UBE2J2Q8N2K1 259 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 GPR32P1Q8NGA4 272 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 TMEM234Q8WY98 164 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 RPL3LQ92901 407 aaKnown RBP7.8□□□□□ -1.16
BEST3-203ENST00000331471 TMEM19Q96HH6 336 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 SDF2Q99470 211 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 NEURL2Q9BR09 285 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 TAPBPLQ9BX59 468 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 LAT2Q9GZY6 243 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 QRSL1Q9H0R6 528 aaKnown RBP7.8□□□□□ -1.16
BEST3-203ENST00000331471 BARX1Q9HBU1 254 aaPredicted RBP7.8□□□□□ -1.16
BEST3-203ENST00000331471 CISD1Q9NZ45 108 aaKnown RBP7.8□□□□□ -1.16
BEST3-203ENST00000331471 REV1Q9UBZ9 1251 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 PEX16Q9Y5Y5 336 aa7.8□□□□□ -1.16
BEST3-203ENST00000331471 SPIN1Q9Y657 262 aaPredicted RBP7.8□□□□□ -1.16
BEST3-203ENST00000331471 IRGMA1A4Y4 181 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 ZNF724A8MTY0 619 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 NPIPB9F8W1W9 429 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 J3KTA2 159 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 CCRL2O00421 344 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 ABCD4O14678 606 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 STX11O75558 287 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 PTTG1O95997 202 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 PTHP01270 115 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 GASTP01350 101 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 IGHV4-39P01824 125 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 TFPIP10646 304 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 ATF4P18848 351 aaPredicted RBP7.79□□□□□ -1.16
BEST3-203ENST00000331471 PGCP20142 388 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 IGHV1-2P23083 117 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 UGT2B15P54855 530 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 KRTAP1-1Q07627 177 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 MAPK11Q15759 364 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 PGGHGQ32M88 737 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 ARMCX4Q5H9R4 360 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 SSX8Q7RTT4 187 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 C16orf62Q7Z3J2 963 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 ZBTB8BQ8NAP8 495 aaPredicted RBP7.79□□□□□ -1.16
BEST3-203ENST00000331471 OR8J1Q8NGP2 316 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 OR52J3Q8NH60 311 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 ZNF563Q8TA94 476 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 ST8SIA1Q92185 356 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 TRAF4Q9BUZ4 470 aaPredicted RBP7.79□□□□□ -1.16
BEST3-203ENST00000331471 TRIM2Q9C040 744 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 SLCO5A1Q9H2Y9 848 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 ANKRD19PQ9H560 264 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 YAE1D1Q9NRH1 226 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 SELENONQ9NZV5 590 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 EMC3Q9P0I2 261 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 ING1Q9UK53 422 aaPredicted RBP7.79□□□□□ -1.16
BEST3-203ENST00000331471 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.79□□□□□ -1.16
BEST3-203ENST00000331471 SLC9A8Q9Y2E8 581 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 IFT52Q9Y366 437 aa7.79□□□□□ -1.16
BEST3-203ENST00000331471 RPL36Q9Y3U8 105 aaKnown RBP7.79□□□□□ -1.16
BEST3-203ENST00000331471 FN1P02751 2386 aaKnown RBP7.79□□□□□ -1.16
BEST3-203ENST00000331471 CIB4A0PJX0 185 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 SULT2B1O00204 365 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 RAMP1O60894 148 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 ADAM11O75078 769 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 UGT2B17O75795 530 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 CSTAP01040 98 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 SCG5P05408 212 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 GSTM3P21266 225 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 S100A5P33763 92 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 SOX6P35712 828 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 DIO1P49895 249 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 PSMD7P51665 324 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 CRISP3P54108 245 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 CASP9P55211 416 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 COPZ1P61923 177 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 LSM3P62310 102 aaKnown RBP7.78□□□□□ -1.16
BEST3-203ENST00000331471 IFITM3Q01628 133 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 SKP2Q13309 424 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 ZNF141Q15928 474 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 ARHGAP11BQ3KRB8 267 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 SYT14P1Q58G82 188 aa7.78□□□□□ -1.16
BEST3-203ENST00000331471 TIMM23BQ5SRD1 257 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms