RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 OR6C68A6NDL8 312 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 AIREO43918 545 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 F13BP05160 661 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 HSMCR30P0CW71 290 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 GABRA1P14867 456 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 GALP22466 123 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 AHCYP23526 432 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 CRABP1P29762 137 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 UGT2B10P36537 528 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 LIPAP38571 399 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 CDKN2AP42771 156 aaKnown RBP14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 AGFG1P52594 562 aaKnown RBP14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 ACTA2P62736 377 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 ACTG2P63267 376 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 MYBPHQ13203 477 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 LSAMPQ13449 338 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 DNM1P34Q6PK57 102 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 TMPPEQ6ZT21 453 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 KCTD20Q7Z5Y7 419 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 UBQLNLQ8IYU4 475 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 C9orf106Q8NAJ2 232 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 CYB561A3Q8NBI2 242 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 ZNF519Q8TB69 540 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 ARL5BQ96KC2 179 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 OR5M11Q96RB7 305 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 NAA11Q9BSU3 229 aaPredicted RBP14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 HCAR1Q9BXC0 346 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 ADGRL4Q9HBW9 690 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 CLEC2DQ9UHP7 191 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 RASD1Q9Y272 281 aa14.61□□□□□ -0.07
PDLIM1-201ENST00000329399 FAM90A27PA6NNH2 459 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 MS4A18H0YCH9 400 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 PHYHO14832 338 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 TGM6O95932 706 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 BCL10O95999 233 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 IMPDH2P12268 514 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 NR2C1P13056 603 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 CEACAM8P31997 349 aaPredicted RBP14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 TFF3Q07654 80 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 MRPL28Q13084 256 aaKnown RBP14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 ACKR1Q16570 336 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 MS4A18Q3C1V0 323 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 EEF1A1P5Q5VTE0 462 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 NSUN5P2Q63ZY6 315 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 PAQR6Q6TCH4 344 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 SYS1Q8N2H4 156 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 OR4F15Q8NGB8 312 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 ZPLD1Q8TCW7 415 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 CA5BP1Q8WTZ4 195 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 SMPDL3BQ92485 455 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 RASD2Q96D21 266 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 ZHX1-C8orf76Q96EF9 292 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 OPALINQ96PE5 141 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 MED20Q9H944 212 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 NDUFB11Q9NX14 153 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 KLF2Q9Y5W3 355 aaPredicted RBP14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 TMEM14AQ9Y6G1 99 aa14.6□□□□□ -0.07
PDLIM1-201ENST00000329399 PRSS37A4D1T9 235 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 C12orf71A8MTZ7 269 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 H3BML4 177 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 SULT2B1O00204 365 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 MT-ND5P03915 603 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 HOXD4P09016 255 aaPredicted RBP14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 PRF1P14222 555 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 SHC1P29353 583 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 CHRNB4P30926 498 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 ACVR1BP36896 505 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 SERPINB10P48595 397 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 FOXF2Q12947 444 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 TRAM1Q15629 374 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 TMEM176BQ3YBM2 270 aaPredicted RBP14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 ZNF322Q6U7Q0 402 aaPredicted RBP14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 ZBTB46Q86UZ6 589 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 PM20D2Q8IYS1 436 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 ZNF485Q8NCK3 441 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 KBTBD8Q8NFY9 601 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 UFD1Q92890 307 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 ZNF845Q96IR2 970 aaPredicted RBP14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 ADAD1Q96M93 576 aaKnown RBP14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 OXGR1Q96P68 337 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 OR5B2Q96R09 309 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 ZNF649Q9BS31 505 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 ALG12Q9BV10 488 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 MARCH7Q9H992 704 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 NPDC1Q9NQX5 325 aaPredicted RBP14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 ASB6Q9NWX5 421 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 BABAM2Q9NXR7 383 aa14.59□□□□□ -0.07
PDLIM1-201ENST00000329399 CD8B2A6NJW9 211 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 AQP7P3A6NL99 342 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 HSPB2A8KAH6 182 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 C11orf98E9PRG8 122 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 ARHGEF9O43307 516 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 ATE1O95260 518 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 ADRA2AP08913 450 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 GAAP10253 952 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 OR2B6P58173 313 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 HSPB2Q16082 182 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 TSTQ16762 297 aaKnown RBP14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 MESTQ5EB52 335 aa14.58□□□□□ -0.08
PDLIM1-201ENST00000329399 PDSS1Q5T2R2 415 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms