RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ZNF485Q8NCK3 441 aa15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 APOOQ9BUR5 198 aa15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 SUCNR1Q9BXA5 334 aa15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 PTRH2Q9Y3E5 179 aaKnown RBP15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 TRAV36DV7A0A075B6V5 113 aa15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 SULT1C4O75897 302 aa15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 ZNF561Q8N587 486 aa15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 LRRC15Q8TF66 581 aa15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 GPR78Q96P69 363 aa15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 FAM103A1Q9BTL3 118 aaKnown RBP15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 MRPL22Q9NWU5 206 aaKnown RBP15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 NUDT22Q9BRQ3 303 aa15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 TIMM29Q9BSF4 260 aa15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 TMEM43Q9BTV4 400 aa15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 ZNF629Q9UEG4 869 aaPredicted RBP15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 MDC1Q14676 2089 aaKnown RBP15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 KIR2DS1A0A191URI9 304 aa15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 TMX2-CTNND1H3BSU7 103 aa15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 KIR2DS4P43632 304 aa15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 KIR2DS1Q14954 304 aa15.57■□□□□ 0.08
SMCHD1-201ENST00000320876 SYT5O00445 386 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 DRD1P21728 446 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 SRP9P49458 86 aaKnown RBP15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 PTTG1IPP53801 180 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 COL13A1Q5TAT6 717 aaPredicted RBP15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 RABEPKQ7Z6M1 372 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 TMEM25Q86YD3 366 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 GPR62Q9BZJ7 368 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 RIMS4Q9H426 269 aaPredicted RBP15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 NKX6-3A6NJ46 265 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 MAOBP27338 520 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 CDK5Q00535 292 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 MFAP5Q13361 173 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 PXDC1Q5TGL8 231 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 SYT9Q86SS6 491 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 BARHL1Q9BZE3 327 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 C12orf10Q9HB07 376 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 CDC14CA4D256 554 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 LAMTOR5O43504 91 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 NTF3P20783 257 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 HOXA11P31270 313 aaPredicted RBP15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 EIF1P41567 113 aaKnown RBP15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 CLDN17P56750 224 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 OR51A4Q8NGJ6 313 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 SLC35A4Q96G79 324 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 SLC46A1Q96NT5 459 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 SLC2A8Q9NY64 477 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 POU3F3P20264 500 aaPredicted RBP15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 REEP5Q00765 189 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 KIF26BQ2KJY2 2108 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 ZNF626Q68DY1 528 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 ZNF596Q8TC21 504 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 ZNF384Q8TF68 577 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 ARNT2Q9HBZ2 717 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 NSG1A0A0A6YYJ2 146 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 TMEM129A0AVI4 362 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 ST8SIA3O43173 380 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 FURINP09958 794 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 GCAP28676 217 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 TAS2R45P59539 299 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 RPL11P62913 178 aaKnown RBP15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 TMEM176BQ3YBM2 270 aaPredicted RBP15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 ANKRD53Q8N9V6 530 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 NMNAT3Q96T66 252 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 PRSS16Q9NQE7 514 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 PISDQ9UG56 409 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 PIPP12273 146 aaPredicted RBP15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 CD1EP15812 388 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 RPUSD3Q6P087 351 aaKnown RBP15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 LRP10Q7Z4F1 713 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 CDC20BQ86Y33 519 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 UBTD2Q8WUN7 234 aa15.56■□□□□ 0.08
SMCHD1-201ENST00000320876 KCPQ6ZWJ8 1503 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 SOX18P35713 384 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 BIDP55957 195 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 OR10A3P58181 314 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 DOC2BQ14184 412 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 PLAC9Q5JTB6 97 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 Q6ZPB1 254 aaPredicted RBP15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 GRAMD2AQ8IUY3 354 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 SRRQ9GZT4 340 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 CA14Q9ULX7 337 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 FUCA1P04066 466 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 CTXN2P0C2S0 81 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 CD46P15529 392 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 TFAP2EQ6VUC0 442 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 NECAP1Q8NC96 275 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 FYTTD1Q96QD9 318 aaKnown RBP15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 CORINQ9Y5Q5 1042 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 AQP7O14520 342 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 CSF2RAP15509 400 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 PIGAP37287 484 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 HNRNPA3P51991 378 aaKnown RBP15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 ZP2Q05996 745 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 IQCJQ1A5X6 159 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 SHISA6Q6ZSJ9 500 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 OR5M11Q96RB7 305 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 CHST8Q9H2A9 424 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 H7C1C5 153 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 EIF1BO60739 113 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms