RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 BTG2P78543 158 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 CLVS2Q5SYC1 327 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 CBLN3Q6UW01 205 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 ATRAIDQ6UW56 229 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 SFTPA2Q8IWL1 248 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 GPBAR1Q8TDU6 330 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 ZNF524Q96C55 264 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 LMF1Q96S06 567 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 EDEM2Q9BV94 578 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 ELOVL3Q9HB03 270 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 UBQLN4Q9NRR5 601 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 CYB5R1Q9UHQ9 305 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 HRH3Q9Y5N1 445 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 DOK2O60496 412 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 RAB3DO95716 219 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 GPANK1O95872 356 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 HOXB2P14652 356 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 FGL1Q08830 312 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 ZNF345Q14585 488 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 TEX30Q5JUR7 227 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 MOB3CQ70IA8 216 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 TAF8Q7Z7C8 310 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 ZNF546Q86UE3 836 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 OOSP2Q86WS3 158 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 KCNRGQ8N5I3 272 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 RELL2Q8NC24 303 aaPredicted RBP17.25■□□□□ 0.35
RTN4-201ENST00000317610 RNF128Q8TEB7 428 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 ATOH1Q92858 354 aaPredicted RBP17.25■□□□□ 0.35
RTN4-201ENST00000317610 IFT46Q9NQC8 304 aa17.25■□□□□ 0.35
RTN4-201ENST00000317610 ZNF107Q9UII5 783 aaPredicted RBP17.25■□□□□ 0.35
RTN4-201ENST00000317610 DNASE2O00115 360 aaPredicted RBP17.24■□□□□ 0.35
RTN4-201ENST00000317610 NDUFA2O43678 99 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 FBXO45P0C2W1 286 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 ZNF735P0CB33 412 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 YPEL5P62699 121 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 TMEM205Q6UW68 189 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 MED25Q71SY5 747 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.24■□□□□ 0.35
RTN4-201ENST00000317610 OR5M8Q8NGP6 311 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 OR1J4Q8NGS1 313 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 ADAMTS18Q8TE60 1221 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 ASB17Q8WXJ9 295 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 TAAR8Q969N4 342 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 SLCO5A1Q9H2Y9 848 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 PRODH2Q9UF12 536 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 CLDN4O14493 209 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 SLC25A4P12235 298 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 CCR4P51679 360 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 GPM6BQ13491 265 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 ERV3-1Q14264 604 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 MEP1BQ16820 701 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 LPCAT3Q6P1A2 487 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 PM20D2Q8IYS1 436 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 BEST3Q8N1M1 668 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 STEAP2Q8NFT2 490 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 OR10K1Q8NGX5 313 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 PHOSPHO1Q8TCT1 267 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 SLC37A2Q8TED4 501 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 HERVK_113Q902F9 699 aa17.24■□□□□ 0.35
RTN4-201ENST00000317610 KIR2DS5A0A0G2JLQ3 304 aa17.23■□□□□ 0.35
RTN4-201ENST00000317610 A0A0G2JNG1 304 aa17.23■□□□□ 0.35
RTN4-201ENST00000317610 MPTX1A8MV57 137 aa17.23■□□□□ 0.35
RTN4-201ENST00000317610 KIR2DS3K7RE56 304 aa17.23■□□□□ 0.35
RTN4-201ENST00000317610 NUPL2O15504 423 aaKnown RBP17.23■□□□□ 0.35
RTN4-201ENST00000317610 ZNF264O43296 627 aa17.23■□□□□ 0.35
RTN4-201ENST00000317610 CD74P04233 296 aa17.23■□□□□ 0.35
RTN4-201ENST00000317610 KIR2DS5Q14953 304 aa17.23■□□□□ 0.35
RTN4-201ENST00000317610 ZMYND11Q15326 602 aa17.23■□□□□ 0.35
RTN4-201ENST00000317610 ATPAF1Q5TC12 328 aaPredicted RBP17.23■□□□□ 0.35
RTN4-201ENST00000317610 TMEM225Q6GV28 225 aa17.23■□□□□ 0.35
RTN4-201ENST00000317610 JMJD6Q6NYC1 403 aaPredicted RBP17.23■□□□□ 0.35
RTN4-201ENST00000317610 ZNF679Q8IYX0 411 aa17.23■□□□□ 0.35
RTN4-201ENST00000317610 GALNT16Q8N428 558 aa17.23■□□□□ 0.35
RTN4-201ENST00000317610 PMEPA1Q969W9 287 aa17.23■□□□□ 0.35
RTN4-201ENST00000317610 SLC41A2Q96JW4 573 aa17.23■□□□□ 0.35
RTN4-201ENST00000317610 ADAM19Q9H013 955 aa17.23■□□□□ 0.35
RTN4-201ENST00000317610 ZNF230Q9UIE0 474 aaPredicted RBP17.23■□□□□ 0.35
RTN4-201ENST00000317610 TNFSF18Q9UNG2 199 aa17.23■□□□□ 0.35
RTN4-201ENST00000317610 IL33O95760 270 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 PNPP00491 289 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 APOC3P02656 99 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 FCER2P06734 321 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 IGFBP3P17936 291 aaPredicted RBP17.22■□□□□ 0.35
RTN4-201ENST00000317610 FSTP19883 344 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 SKP1P63208 163 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 ROM1Q03395 351 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 NR0B2Q15466 257 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 GLT8D1Q68CQ7 371 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 C19orf47Q8N9M1 422 aaKnown RBP17.22■□□□□ 0.35
RTN4-201ENST00000317610 TINAGL1Q9GZM7 467 aaPredicted RBP17.22■□□□□ 0.35
RTN4-201ENST00000317610 GPN3Q9UHW5 284 aaPredicted RBP17.22■□□□□ 0.35
RTN4-201ENST00000317610 SLC22A13Q9Y226 551 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 CACNA1IQ9P0X4 2223 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 OR2W5A6NFC9 320 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 OR5H14A6NHG9 310 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 OR5K4A6NMS3 321 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 SCDO00767 359 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 OR2F2O95006 317 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 MAOAP21397 527 aa17.22■□□□□ 0.35
RTN4-201ENST00000317610 ACHEP22303 614 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms