RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 PRSS27Q9BQR3 290 aa12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 MED29Q9NX70 200 aa12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 OR52A1Q9UKL2 312 aa12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 MTCL1Q9Y4B5 1905 aaKnown RBP12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 ARID1AO14497 2285 aa12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 F5H5P2 479 aa12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 SEMA7AO75326 666 aa12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 RLN2P04090 185 aa12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 ZNF28P17035 718 aa12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 GALP22466 123 aa12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 CDKN2AP42771 156 aaKnown RBP12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 CLDN17P56750 224 aa12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 CLDN20P56880 219 aa12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 IL10RAQ13651 578 aa12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 RBMS2Q15434 407 aaKnown RBP12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 ZNF658BQ4V348 819 aaPredicted RBP12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 TAAR8Q969N4 342 aa12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 FOXRED1Q96CU9 486 aaPredicted RBP12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 SORCS2Q96PQ0 1159 aa12.18□□□□□ -0.46
PCDHB9-201ENST00000316105 TRAV1-2A0A0B4J238 106 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 NUPL2O15504 423 aaKnown RBP12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 FOXS1O43638 330 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 MAGEB1P43366 347 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 CBX5P45973 191 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 RNF4P78317 190 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 ZNF85Q03923 595 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 SRYQ05066 204 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 SMUG1Q53HV7 270 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 FAM198BQ6UWH4 519 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 STAC2Q6ZMT1 411 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 RFPL4BQ6ZWI9 263 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 FAM57BQ71RH2 274 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 LDAHQ9H6V9 325 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 MRPS18AQ9NVS2 196 aaKnown RBP12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 TCF20Q9UGU0 1960 aaKnown RBP12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 OR6C76A6NM76 312 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 GJE1A6NN92 205 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 IFNA21P01568 189 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 APOBEC1P41238 236 aaKnown RBP12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 HSF1Q00613 529 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 NPSR1Q6W5P4 371 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 GRAMD2AQ8IUY3 354 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 BPIFB2Q8N4F0 458 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 IL22RA1Q8N6P7 574 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 GALNT11Q8NCW6 608 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 DVL3Q92997 716 aaPredicted RBP12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 HAVCR1Q96D42 359 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 SEC22CQ9BRL7 303 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 TXNIPQ9H3M7 391 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 FRMPD3Q5JV73 1810 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 ZFPL1O95159 310 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 SCGB1D2O95969 90 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 TP53P04637 393 aaPredicted RBP12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 CT45A8P0DMV1 189 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 CT45A9P0DMV2 189 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 SLC2A1P11166 492 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 DPP4P27487 766 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 NXPH1P58417 271 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 ZNF79Q15937 498 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 CT45A2Q5DJT8 189 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 TRIM61Q5EBN2 209 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 RABEPKQ7Z6M1 372 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 ZNF679Q8IYX0 411 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 LSMEM1Q8N8F7 131 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 GPR119Q8TDV5 335 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 FGGYQ96C11 551 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 SCARF2Q96GP6 870 aaPredicted RBP12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 NXF2Q9GZY0 626 aaKnown RBP12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 SLCO1C1Q9NYB5 712 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 F5H0A9 414 aaPredicted RBP12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 SULT1B1O43704 296 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 MTRF1O75570 445 aaKnown RBP12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 CER1O95813 267 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 RAF1P04049 648 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 LCATP04180 440 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 CALCBP10092 127 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 BDKRB2P30411 391 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 CSNK2A1P68400 391 aaPredicted RBP12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 C16orf47Q6ZP98 133 aaPredicted RBP12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 OR51T1Q8NGJ9 327 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 ULBP2Q9BZM5 246 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 RNF32Q9H0A6 362 aa12.17□□□□□ -0.46
PCDHB9-201ENST00000316105 AHCTF1Q8WYP5 2266 aa12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 LOC100289279A0A1B0GTE1 492 aa12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 A0A1W2PNR3 127 aa12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 SCGNO76038 276 aa12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 SYNGR4O95473 234 aa12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 ITGA3P26006 1051 aa12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 RBMXP38159 391 aaKnown RBP12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 GPR3P46089 330 aa12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 TAS2R20P59543 309 aa12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 RAB12Q6IQ22 244 aa12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 KMT5CQ86Y97 462 aa12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 SPTSSAQ969W0 71 aa12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 CHST11Q9NPF2 352 aa12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 B4GALT7Q9UBV7 327 aa12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 WRBO00258 174 aa12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 SNAPC5O75971 98 aa12.16□□□□□ -0.46
PCDHB9-201ENST00000316105 C1QBP02746 253 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms