RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 OR2W5A6NFC9 320 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 GGT3PA6NGU5 568 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 SERINC4A6NH21 518 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 OR6C70A6NIJ9 312 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 A6NIN4 97 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 PLPP3O14495 311 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 GFRA3O60609 400 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 PDGFAP04085 211 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 HEXAP06865 529 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 CD3GP09693 182 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 ACTA2P62736 377 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 ACTG2P63267 376 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 CCL7P80098 99 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 BTBD16Q32M84 506 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 PLAC9Q5JTB6 97 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 C1QL3Q5VWW1 255 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 PCSK4Q6UW60 755 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 OR4N5Q8IXE1 308 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 SLC35F3Q8IY50 421 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 SPERTQ8NA61 448 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 GPR119Q8TDV5 335 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 SLC37A2Q8TED4 501 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 RRNAD1Q96FB5 475 aaKnown RBP6.96□□□□□ -1.29
CNOT4-201ENST00000315544 KCNK15Q9H427 330 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 RANBP3Q9H6Z4 567 aaPredicted RBP6.96□□□□□ -1.29
CNOT4-201ENST00000315544 TANC2Q9HCD6 1990 aa6.96□□□□□ -1.29
CNOT4-201ENST00000315544 H0YIG0 161 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 KPNA3O00505 521 aaPredicted RBP6.96□□□□□ -1.3
CNOT4-201ENST00000315544 GPANK1O95872 356 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 MT-ND4P03905 459 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 HRGP04196 525 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 GYPBP06028 91 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 NAT2P11245 290 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 SSR2P43308 183 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 MAB21L1Q13394 359 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 TSSK4Q6SA08 328 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 CEACAM19Q7Z692 300 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 ZNF227Q86WZ6 799 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 SLC25A45Q8N413 288 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 OR4C16Q8NGL9 310 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 OR4C6Q8NH72 309 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 PPP1R14AQ96A00 147 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 MNTQ99583 582 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 RTBDNQ9BSG5 229 aaPredicted RBP6.96□□□□□ -1.3
CNOT4-201ENST00000315544 MRI1Q9BV20 369 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 LAT2Q9GZY6 243 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 HSF4Q9ULV5 492 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 NCKAP1Q9Y2A7 1128 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 CENPXA8MT69 81 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 RAB6AP20340 208 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 TMEM50BP56557 158 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 TAS2R41P59536 307 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 SRP54P61011 504 aaKnown RBP6.96□□□□□ -1.3
CNOT4-201ENST00000315544 RPL18Q07020 188 aaKnown RBP6.96□□□□□ -1.3
CNOT4-201ENST00000315544 ALKBH1Q13686 389 aaKnown RBP6.96□□□□□ -1.3
CNOT4-201ENST00000315544 SLC22A10Q63ZE4 541 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 ZNF574Q6ZN55 896 aaPredicted RBP6.96□□□□□ -1.3
CNOT4-201ENST00000315544 SNIP1Q8TAD8 396 aaKnown RBP6.96□□□□□ -1.3
CNOT4-201ENST00000315544 CD180Q99467 661 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 CYB5R1Q9UHQ9 305 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 ZNF230Q9UIE0 474 aaPredicted RBP6.96□□□□□ -1.3
CNOT4-201ENST00000315544 GPR160Q9UJ42 338 aa6.96□□□□□ -1.3
CNOT4-201ENST00000315544 KIAA1324LA8MWY0 1029 aaPredicted RBP6.95□□□□□ -1.3
CNOT4-201ENST00000315544 SLC17A2O00624 439 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 PRAF2O60831 178 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 PSMB1P20618 241 aaKnown RBP6.95□□□□□ -1.3
CNOT4-201ENST00000315544 PPICP45877 212 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 SNRPD2P62316 118 aaKnown RBP6.95□□□□□ -1.3
CNOT4-201ENST00000315544 CRYZQ08257 329 aaKnown RBP6.95□□□□□ -1.3
CNOT4-201ENST00000315544 BHLHE23Q8NDY6 225 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 OR1J4Q8NGS1 313 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 ASB10Q8WXI3 467 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 CARHSP1Q9Y2V2 147 aaKnown RBP6.95□□□□□ -1.3
CNOT4-201ENST00000315544 TEX13CA0A0J9YWL9 993 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 NAP1L6A6NFF2 107 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 MEN1O00255 615 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 SULT1C2O00338 296 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 RAD51DO75771 328 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 RAB40ALP0C0E4 278 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 DEFA1P59665 94 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 DEFA3P59666 94 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 TP53I3Q53FA7 332 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 GKN2Q86XP6 184 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 GALNT16Q8N428 558 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 TMEM229BQ8NBD8 167 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 SRFBP1Q8NEF9 429 aaKnown RBP6.95□□□□□ -1.3
CNOT4-201ENST00000315544 OR13H1Q8NG92 308 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 RAB40AQ8WXH6 277 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 ST8SIA4Q92187 359 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 FERD3LQ96RJ6 166 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 C1QTNF6Q9BXI9 259 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 FOXD3Q9UJU5 478 aaPredicted RBP6.95□□□□□ -1.3
CNOT4-201ENST00000315544 NPIPA2E9PIF3 369 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 GLAP06280 429 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 SLC35G4P0C7Q5 338 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 CAPZBP47756 277 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 HSD17B7P56937 341 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 Q499Y3 187 aa6.95□□□□□ -1.3
CNOT4-201ENST00000315544 ATPAF1Q5TC12 328 aaPredicted RBP6.95□□□□□ -1.3
CNOT4-201ENST00000315544 RSBN1Q5VWQ0 802 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms