RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 ZNF620Q6ZNG0 422 aa12.58□□□□□ -0.39
CLCN6-201ENST00000312413 DCXRQ7Z4W1 244 aa12.58□□□□□ -0.39
CLCN6-201ENST00000312413 Q96M85 177 aa12.58□□□□□ -0.39
CLCN6-201ENST00000312413 DHRS9Q9BPW9 319 aa12.58□□□□□ -0.39
CLCN6-201ENST00000312413 OCEL1Q9H607 264 aa12.58□□□□□ -0.39
CLCN6-201ENST00000312413 GDE1Q9NZC3 331 aa12.58□□□□□ -0.39
CLCN6-201ENST00000312413 CHST2Q9Y4C5 530 aa12.58□□□□□ -0.39
CLCN6-201ENST00000312413 PIK3C2AO00443 1686 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 RPA2P15927 270 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 ADRA2CP18825 462 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 ACHEP22303 614 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 CLDN20P56880 219 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 Q6ZRG5 221 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 PAQR9Q6ZVX9 377 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 FAM71CQ8NEG0 241 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 GABARAPL3Q9BY60 117 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 TAAR2Q9P1P5 351 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 OR5H14A6NHG9 310 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 ZNF587BE7ETH6 402 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 PRKRAO75569 313 aaKnown RBP12.58□□□□□ -0.4
CLCN6-201ENST00000312413 OR8U8P0C7N1 319 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 CEBPBP17676 345 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 RAD52P43351 418 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 LIPNQ5VXI9 398 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 PBX4Q9BYU1 374 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 ACOXLQ9NUZ1 547 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 CHRNA9Q9UGM1 479 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 TUBAL3A6NHL2 446 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 SLC35E2P0CK97 266 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 AMIGO3Q86WK7 504 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 CATSPERDQ86XM0 798 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 SEMA6DQ8NFY4 1073 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 DUS3LQ96G46 650 aaKnown RBP12.58□□□□□ -0.4
CLCN6-201ENST00000312413 TMEM231Q9H6L2 316 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 DYNLRB1Q9NP97 96 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 CD1EP15812 388 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 POU3F3P20264 500 aaPredicted RBP12.58□□□□□ -0.4
CLCN6-201ENST00000312413 GABRG1Q8N1C3 465 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 SLC39A11Q8N1S5 342 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 SLC16A11Q8NCK7 471 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 OR11L1Q8NGX0 322 aa12.58□□□□□ -0.4
CLCN6-201ENST00000312413 ZNF891A8MT65 544 aaPredicted RBP12.57□□□□□ -0.4
CLCN6-201ENST00000312413 J3QR89 54 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 HSD17B6O14756 317 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 NXPH2O95156 264 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 ALOX5APP20292 161 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 GABRA4P48169 554 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 PFN3P60673 137 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 ARL16Q0P5N6 197 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 RAB35Q15286 201 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 BTNL8Q6UX41 500 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 SLC35G3Q8N808 338 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 C19orf47Q8N9M1 422 aaKnown RBP12.57□□□□□ -0.4
CLCN6-201ENST00000312413 HS3ST2Q9Y278 367 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 ZNF142P52746 1687 aaPredicted RBP12.57□□□□□ -0.4
CLCN6-201ENST00000312413 KIR2DS1A0A191URI9 304 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 TNFRSF4P43489 277 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 KIR2DS4P43632 304 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 MRPL19P49406 292 aaKnown RBP12.57□□□□□ -0.4
CLCN6-201ENST00000312413 EVX1P49640 407 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 GRB2P62993 217 aaKnown RBP12.57□□□□□ -0.4
CLCN6-201ENST00000312413 ENDOGQ14249 297 aaKnown RBP12.57□□□□□ -0.4
CLCN6-201ENST00000312413 KIR2DS1Q14954 304 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 HAGHQ16775 308 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 PPP1R3BQ86XI6 285 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 RBM45Q8IUH3 476 aaKnown RBP12.57□□□□□ -0.4
CLCN6-201ENST00000312413 FAM185AQ8N0U4 392 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 ZNF561Q8N587 486 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 BPIFCQ8NFQ6 507 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 LRIT1Q9P2V4 623 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 SSUH2Q9Y2M2 353 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 K7EQM0 130 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 SOD1P00441 154 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 GSTP1P09211 210 aaKnown RBP12.57□□□□□ -0.4
CLCN6-201ENST00000312413 H3F3AP84243 136 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 OLIG3Q7RTU3 272 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 VRK3Q8IV63 474 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 NKAIN4Q8IVV8 208 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 RELL2Q8NC24 303 aaPredicted RBP12.57□□□□□ -0.4
CLCN6-201ENST00000312413 LIPHQ8WWY8 451 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 TOE1Q96GM8 510 aaKnown RBP12.57□□□□□ -0.4
CLCN6-201ENST00000312413 BCO1Q9HAY6 547 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 V9GYS6 101 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 CITO14578 2027 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 ZNF727A8MUV8 499 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 ZNF732B4DXR9 585 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 SEC14L6B5MCN3 397 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 ZNF354AO60765 605 aaPredicted RBP12.57□□□□□ -0.4
CLCN6-201ENST00000312413 MT-ATP6P00846 226 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 ABHD17CQ6PCB6 329 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 TMEM99Q8N816 258 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 BADQ92934 168 aa12.57□□□□□ -0.4
CLCN6-201ENST00000312413 FAM155AB1AL88 458 aaPredicted RBP12.56□□□□□ -0.4
CLCN6-201ENST00000312413 ENSAO43768 121 aaKnown RBP12.56□□□□□ -0.4
CLCN6-201ENST00000312413 EIF1BO60739 113 aaKnown RBP12.56□□□□□ -0.4
CLCN6-201ENST00000312413 RGS11O94810 467 aa12.56□□□□□ -0.4
CLCN6-201ENST00000312413 CSF3P09919 207 aa12.56□□□□□ -0.4
CLCN6-201ENST00000312413 FCGR2CP31995 323 aa12.56□□□□□ -0.4
CLCN6-201ENST00000312413 SLC6A11P48066 632 aa12.56□□□□□ -0.4
CLCN6-201ENST00000312413 OR2L13Q8N349 312 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms