RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 OR14L1PQ8NHC6 308 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 ZNF583Q96ND8 569 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 FGF21Q9NSA1 209 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 RYDENQ9NUL5 291 aaKnown RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 MED17Q9NVC6 651 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 PPP1R14DQ9NXH3 145 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 STEAP1Q9UHE8 339 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 MRPS2Q9Y399 296 aaKnown RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 CSAG2Q9Y5P2 127 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 ETV7Q9Y603 341 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 ARL2-SNX15V9GYD0 113 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 OR6C68A6NDL8 312 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 TMEM200CA6NKL6 621 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 PHOX2AO14813 284 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 SIGLEC6O43699 453 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 PTBP3O95758 552 aaKnown RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 HPNP05981 417 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 GP2P55259 537 aaKnown RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 SRYQ05066 204 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 PMS2CLQ68D20 193 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 LINC00299Q6ZSB3 139 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 CPEB2Q7Z5Q1 589 aaKnown RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 TMEM130Q8N3G9 435 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 OR51S1Q8NGJ8 323 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 ISL2Q96A47 359 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 INTS12Q96CB8 462 aaKnown RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 OR6C1Q96RD1 312 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 METTL9Q9H1A3 318 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 PRELID3BQ9Y3B1 194 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 ANKRD30BLA7E2S9 258 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 ZNF728P0DKX0 622 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 TACR3P29371 465 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 MLF1P58340 268 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 SUMO1P63165 101 aaKnown RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 HBA1P69905 142 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 CDC20Q12834 499 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 AFMIDQ63HM1 303 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 DHRS13Q6UX07 377 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 MAVSQ7Z434 540 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 KLHDC8BQ8IXV7 354 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 OR5AR1Q8NGP9 310 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 ANGPTL6Q8NI99 470 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 DPF1Q92782 380 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 NIPSNAP1Q9BPW8 284 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 PDCD1LG2Q9BQ51 273 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 LRFN3Q9BTN0 628 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 PLK3Q9H4B4 646 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 EPHX3Q9H6B9 360 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 CUTCQ9NTM9 273 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 PHF1O43189 567 aaPredicted RBP7.53□□□□□ -1.2
VPS41-202ENST00000310301 CLDN1O95832 211 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 F10P00742 488 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 IGLV3-27P01718 113 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 EPHA4P54764 986 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 IGSF11Q5DX21 431 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 SECTM1Q8WVN6 248 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 UBE2FQ969M7 185 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 REEP6Q96HR9 211 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 TPPP3Q9BW30 176 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 TMEM59Q9BXS4 323 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 KCNIP2Q9NS61 270 aa7.53□□□□□ -1.2
VPS41-202ENST00000310301 ADAMTSL1Q8N6G6 1762 aa7.52□□□□□ -1.2
VPS41-202ENST00000310301 ANKUB1A6NFN9 424 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 OR2T1O43869 369 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 OR2F2O95006 317 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 CD79AP11912 226 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 FCGR2AP12318 317 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 NQO2P16083 231 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 ATP1B3P54709 279 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 OR2F1Q13607 317 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 HAGHQ16775 308 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 Q499Y3 187 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 FAM57BQ71RH2 274 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 ALOXE3Q9BYJ1 711 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 TOLLIPQ9H0E2 274 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 SPNS1Q9H2V7 528 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 CDH20Q9HBT6 801 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 SLC22A7Q9Y694 548 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 MYO10Q9HD67 2058 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 RNF212BA8MTL3 300 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 SEC14L6B5MCN3 397 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 OR2T7P0C7T2 308 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 METTL15P1P0C7V9 234 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 NTF3P20783 257 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 MRPL19P49406 292 aaKnown RBP7.52□□□□□ -1.21
VPS41-202ENST00000310301 NPY4RP50391 375 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 ARHGAP11BQ3KRB8 267 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 NXNL2Q5VZ03 156 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 Q6ZTK2 550 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 SIGLECL1Q8N7X8 197 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 SUMF1Q8NBK3 374 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 DMBX1Q8NFW5 382 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 OR2T27Q8NH04 317 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 UCN3Q969E3 161 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 OR51B6Q9H340 312 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 RAB9BQ9NP90 201 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 IL26Q9NPH9 171 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 GAR1Q9NY12 217 aaKnown RBP7.52□□□□□ -1.21
VPS41-202ENST00000310301 VDAC3Q9Y277 283 aa7.52□□□□□ -1.21
VPS41-202ENST00000310301 FAM96BQ9Y3D0 163 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms