RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 HLA-DMAP28067 261 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 S100A7P31151 101 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 DUSP7Q16829 419 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 SPATA46Q5T0L3 261 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 Q6ZPB1 254 aaPredicted RBP9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 USP51Q70EK9 711 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 SPIN2AQ99865 258 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 SPIN2BQ9BPZ2 258 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 TP63Q9H3D4 680 aaPredicted RBP9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 CNOT11Q9UKZ1 510 aaKnown RBP9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 CLDN24A6NM45 220 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 CTSVO60911 334 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 NCR1O76036 304 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 B4GALT1P15291 398 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 BLVRBP30043 206 aaPredicted RBP9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 PPP5CP53041 499 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 FGL1Q08830 312 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 RNPS1Q15287 305 aaKnown RBP9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 FXNQ16595 210 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 CCDC58Q4VC31 144 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 B3GNTL1Q67FW5 361 aaPredicted RBP9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 BHLHA9Q7RTU4 235 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 GPR119Q8TDV5 335 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 RANBP3Q9H6Z4 567 aaPredicted RBP9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 KIAA1456Q9P272 454 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 ONECUT1Q9UBC0 465 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 ASH2LQ9UBL3 628 aa9.75□□□□□ -0.85
SYNPO2-201ENST00000307142 NINQ8N4C6 2090 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 A0A1B0GV50 99 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 OR5H15A6NDH6 313 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 HMX3A6NHT5 357 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 CDX4O14627 284 aaPredicted RBP9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 RGS11O94810 467 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 GM2AP17900 193 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 NFATC3Q12968 1075 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 HAGHLQ6PII5 290 aaPredicted RBP9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 PRSS41Q7RTY9 318 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 MARVELD2Q8N4S9 558 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 OR4D6Q8NGJ1 314 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 OR4A16Q8NH70 328 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 CD300LFQ8TDQ1 290 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 RAB3CQ96E17 227 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 NICN1Q9BSH3 213 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 A8MV72 311 aaPredicted RBP9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 RP2O75695 350 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 PIPP12273 146 aaPredicted RBP9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 DAPP51397 102 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 FCRL6Q6DN72 434 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 B3GNT8Q7Z7M8 397 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 SLCO4A1Q96BD0 722 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 S1PR5Q9H228 398 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 SPNS1Q9H2V7 528 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 ARID2Q68CP9 1835 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 PPIHO43447 177 aaKnown RBP9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 UBL3O95164 117 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 MT-CO2P00403 227 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 ALKBH1Q13686 389 aaKnown RBP9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 ZFAND1Q8TCF1 268 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 MED29Q9NX70 200 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 HPGDSO60760 199 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 IFNA7P01567 189 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 ZNF93P35789 620 aaPredicted RBP9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 SECTM1Q8WVN6 248 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 COX14Q96I36 57 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 C19orf43Q9BQ61 176 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 A0A1W2PR80 420 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 HOXB3P14651 431 aaPredicted RBP9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 FPR3P25089 353 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 TAS2R46P59540 309 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 SLC35D3Q5M8T2 416 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 OR2G6Q5TZ20 316 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 NXNL2Q5VZ03 156 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 DPY19L2P1Q6NXN4 242 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 SLC16A9Q7RTY1 509 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 CARFQ8N187 725 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 OR56B1Q8NGI3 324 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 M1APQ8TC57 530 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 HAS2Q92819 552 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 LOC285556D6RIA3 1793 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 TET1Q8NFU7 2136 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 CSF1P09603 554 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 DRD5P21918 477 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 S100A1P23297 94 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 CATR1Q13166 79 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 AGAP6Q5VW22 663 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 SLC15A4Q8N697 577 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 FAM71CQ8NEG0 241 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 LRRC3BQ96PB8 259 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 NOX4Q9NPH5 578 aa9.74□□□□□ -0.85
SYNPO2-201ENST00000307142 TCRBV3S1A0A5B6 114 aa9.73□□□□□ -0.85
SYNPO2-201ENST00000307142 HSD17B6O14756 317 aa9.73□□□□□ -0.85
SYNPO2-201ENST00000307142 SH2D1BO14796 132 aa9.73□□□□□ -0.85
SYNPO2-201ENST00000307142 LIPCP11150 499 aa9.73□□□□□ -0.85
SYNPO2-201ENST00000307142 MAP2K6P52564 334 aa9.73□□□□□ -0.85
SYNPO2-201ENST00000307142 DEFA5Q01523 94 aa9.73□□□□□ -0.85
SYNPO2-201ENST00000307142 FGFBP1Q14512 234 aa9.73□□□□□ -0.85
SYNPO2-201ENST00000307142 ACKR1Q16570 336 aa9.73□□□□□ -0.85
SYNPO2-201ENST00000307142 ZNF468Q5VIY5 522 aaPredicted RBP9.73□□□□□ -0.85
SYNPO2-201ENST00000307142 DHRS4L2Q6PKH6 230 aa9.73□□□□□ -0.85
SYNPO2-201ENST00000307142 CHDHQ8NE62 594 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms