RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 FAM3DQ96BQ1 224 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 AMDHD1Q96NU7 426 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 GLIPR2Q9H4G4 154 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 TREX1Q9NSU2 369 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 C17orf113A0A1B0GUU1 675 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 SCRG1O75711 98 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 HPNP05981 417 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 ZC3H3Q8IXZ2 948 aaKnown RBP11.63□□□□□ -0.55
USP38-201ENST00000307017 TMEM102Q8N9M5 508 aaPredicted RBP11.63□□□□□ -0.55
USP38-201ENST00000307017 IL17CQ9P0M4 197 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 KIF25Q9UIL4 384 aa11.63□□□□□ -0.55
USP38-201ENST00000307017 ONECUT2O95948 504 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 CPN1P15169 458 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 IMPA1P29218 277 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 OPRD1P41143 372 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 TNFRSF17Q02223 184 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 ZNF528Q3MIS6 628 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 ST8SIA4Q92187 359 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 SLC22A12Q96S37 553 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 PHRF1Q9P1Y6 1649 aaKnown RBP11.62□□□□□ -0.55
USP38-201ENST00000307017 A0A1W2PNR3 127 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 NAP1L6A6NFF2 107 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 TAS2R46P59540 309 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 ALKBH1Q13686 389 aaKnown RBP11.62□□□□□ -0.55
USP38-201ENST00000307017 OR51E1Q8TCB6 317 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 CPPED1Q9BRF8 314 aaPredicted RBP11.62□□□□□ -0.55
USP38-201ENST00000307017 WDR83Q9BRX9 315 aaKnown RBP11.62□□□□□ -0.55
USP38-201ENST00000307017 NIPSNAP3BQ9BS92 247 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 MKS1Q9NXB0 559 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 PRR13Q9NZ81 148 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 CTSFQ9UBX1 484 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 SLC23A1Q9UHI7 598 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 CDK5RAP2Q96SN8 1893 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 C17orf112F2Z3M2 114 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 PRAF2O60831 178 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 NQO2P16083 231 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 TMEM267Q0VDI3 215 aaPredicted RBP11.62□□□□□ -0.55
USP38-201ENST00000307017 PLK5Q496M5 336 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 MARC2Q969Z3 335 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 C8orf44Q96CB5 159 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 SRRQ9GZT4 340 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 ZNF264O43296 627 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 SIGLEC6O43699 453 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 ALOX12BO75342 701 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 SNCAP37840 140 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 FAM27D1Q5T7N8 215 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 C15orf39Q6ZRI6 1047 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 COMMD1Q8N668 190 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 BARX1Q9HBU1 254 aaPredicted RBP11.62□□□□□ -0.55
USP38-201ENST00000307017 TAF1P21675 1872 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 TMED7-TICAM2A0A0A6YYA0 188 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 A0A0D9SG52 128 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 TRABD2BA6NFA1 517 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 ZNF701M0R085 212 aaPredicted RBP11.62□□□□□ -0.55
USP38-201ENST00000307017 CDK2AP1O14519 115 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 CNR1P21554 472 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 RFPL4BQ6ZWI9 263 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 OR52N5Q8NH56 324 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 TCTN2Q96GX1 697 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 CASD1Q96PB1 797 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 HOXD1Q9GZZ0 328 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 SLC5A6Q9Y289 635 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 TRAPPC4Q9Y296 219 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 TMED7Q9Y3B3 224 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 LAMA4Q16363 1823 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 KCPQ6ZWJ8 1503 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 A0A1W2PRD5 423 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 A0A1W2PRF3 423 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 A0A1W2PRM7 423 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 PSMB1P20618 241 aaKnown RBP11.62□□□□□ -0.55
USP38-201ENST00000307017 PSMB3P49720 205 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 SLC7A13Q8TCU3 470 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 TANKQ92844 425 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 AKR1E2Q96JD6 320 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 TWSG1Q9GZX9 223 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 SLC35D1Q9NTN3 355 aa11.62□□□□□ -0.55
USP38-201ENST00000307017 PHLPP1O60346 1717 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 LOC102725191A0A1B0GVB3 256 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 AK1P00568 194 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 CDAP32320 146 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 SEMA6DQ8NFY4 1073 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 GPR32P1Q8NGA4 272 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 Q96M85 177 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 XRCC2O43543 280 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 FGF4P08620 206 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 BCL6P41182 706 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 ZNF239Q16600 458 aaKnown RBP11.61□□□□□ -0.55
USP38-201ENST00000307017 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.61□□□□□ -0.55
USP38-201ENST00000307017 OR4N2Q8NGD1 307 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 CMTM2Q8TAZ6 248 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 ATOH8Q96SQ7 321 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 ZNF2Q9BSG1 426 aaPredicted RBP11.61□□□□□ -0.55
USP38-201ENST00000307017 HRH3Q9Y5N1 445 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 NEURL4Q96JN8 1562 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 COL2A1P02458 1487 aaPredicted RBP11.61□□□□□ -0.55
USP38-201ENST00000307017 SPRY1O43609 319 aaPredicted RBP11.61□□□□□ -0.55
USP38-201ENST00000307017 PMCHP20382 165 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 AAED1Q7RTV5 226 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 BTLAQ7Z6A9 289 aa11.61□□□□□ -0.55
USP38-201ENST00000307017 SLC35G3Q8N808 338 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms