RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 OR2G2Q8NGZ5 317 aa12.12□□□□□ -0.47
DDX54-201ENST00000306014 BAHD1Q8TBE0 780 aaPredicted RBP12.12□□□□□ -0.47
DDX54-201ENST00000306014 ARPC5LQ9BPX5 153 aa12.12□□□□□ -0.47
DDX54-201ENST00000306014 KCNG2Q9UJ96 466 aa12.12□□□□□ -0.47
DDX54-201ENST00000306014 ZNF346Q9UL40 294 aaKnown RBP12.12□□□□□ -0.47
DDX54-201ENST00000306014 CA14Q9ULX7 337 aa12.12□□□□□ -0.47
DDX54-201ENST00000306014 COA3Q9Y2R0 106 aaPredicted RBP12.12□□□□□ -0.47
DDX54-201ENST00000306014 MED6O75586 246 aa12.12□□□□□ -0.47
DDX54-201ENST00000306014 SERPINA2P20848 420 aa12.12□□□□□ -0.47
DDX54-201ENST00000306014 GABRR1P24046 479 aa12.12□□□□□ -0.47
DDX54-201ENST00000306014 PARM1Q6UWI2 310 aa12.12□□□□□ -0.47
DDX54-201ENST00000306014 DCXRQ7Z4W1 244 aa12.12□□□□□ -0.47
DDX54-201ENST00000306014 TSEN54Q7Z6J9 526 aaKnown RBP12.12□□□□□ -0.47
DDX54-201ENST00000306014 WDR89Q96FK6 387 aaPredicted RBP12.12□□□□□ -0.47
DDX54-201ENST00000306014 SLCO5A1Q9H2Y9 848 aa12.12□□□□□ -0.47
DDX54-201ENST00000306014 BRWD1Q9NSI6 2320 aa12.12□□□□□ -0.47
DDX54-201ENST00000306014 DICER1Q9UPY3 1922 aaKnown RBP12.12□□□□□ -0.47
DDX54-201ENST00000306014 A0A0B4J2E0 115 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 A0A1B0GX12 115 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 CTSVO60911 334 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 IGHA1P01876 353 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 PMP2P02689 132 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 ZNF250P15622 560 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 LIMS1P48059 325 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 PMPCAQ10713 525 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 MANEAQ5SRI9 462 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 GLDNQ6ZMI3 551 aaPredicted RBP12.11□□□□□ -0.47
DDX54-201ENST00000306014 OR11H7Q8NGC8 314 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 PTP4A1Q93096 173 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 LRFN5Q96NI6 719 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 SDHCQ99643 169 aaPredicted RBP12.11□□□□□ -0.47
DDX54-201ENST00000306014 ZNF304Q9HCX3 659 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 SLC22A23A1A5C7 686 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 C2orf72A6NCS6 295 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 OR5K3A6NET4 321 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 LEUTXA8MZ59 168 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 HSPA12AO43301 675 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 GMDSO60547 372 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 ZNF16P17020 682 aaPredicted RBP12.11□□□□□ -0.47
DDX54-201ENST00000306014 RAB6AP20340 208 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 RAB3CQ96E17 227 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 OR52A1Q9UKL2 312 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 SLC17A4Q9Y2C5 497 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 OR5H14A6NHG9 310 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 GREM1O60565 184 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 TNFRSF4P43489 277 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 CAV2P51636 162 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 POLR2HP52434 150 aaKnown RBP12.11□□□□□ -0.47
DDX54-201ENST00000306014 KCNAB1Q14722 419 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 SLC36A2Q495M3 483 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 OR14A16Q8NHC5 309 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 TMEM59Q9BXS4 323 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 ACAD8Q9UKU7 415 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 HRH3Q9Y5N1 445 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 SBF1O95248 1867 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 PSME4Q14997 1843 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 CFIP05156 583 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 DUSP2Q05923 314 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 VN1R4Q7Z5H5 301 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 SULF2Q8IWU5 870 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 FAM160A2Q8N612 972 aaPredicted RBP12.11□□□□□ -0.47
DDX54-201ENST00000306014 MARC2Q969Z3 335 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 SLC46A1Q96NT5 459 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 SLC7A11Q9UPY5 501 aa12.11□□□□□ -0.47
DDX54-201ENST00000306014 UBE2J1Q9Y385 318 aaPredicted RBP12.11□□□□□ -0.47
DDX54-201ENST00000306014 BLACEA4D250 179 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 SLC2A1P11166 492 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 ACHEP22303 614 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 CAMK2DQ13557 499 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 ACKR1Q16570 336 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 ZNF687Q8N1G0 1237 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 C1orf198Q9H425 327 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 ZNF236Q9UL36 1845 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 DSPPQ9NZW4 1301 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 A0A1B0GTH9 108 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 OR6C68A6NDL8 312 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 HPXP02790 462 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 SNRNP70P08621 437 aaKnown RBP12.1□□□□□ -0.47
DDX54-201ENST00000306014 SELENOPP49908 381 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 NPY4RP50391 375 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 ZNF85Q03923 595 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 DOC2BQ14184 412 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 FAM57BQ71RH2 274 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 KIAA0907Q7Z7F0 614 aaPredicted RBP12.1□□□□□ -0.47
DDX54-201ENST00000306014 DND1Q8IYX4 353 aaKnown RBP12.1□□□□□ -0.47
DDX54-201ENST00000306014 OR4C3Q8NH37 302 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 HHIPQ96QV1 700 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 BIN3Q9NQY0 253 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 SIRT4Q9Y6E7 314 aaPredicted RBP12.1□□□□□ -0.47
DDX54-201ENST00000306014 PTPRZ1P23471 2315 aaPredicted RBP12.1□□□□□ -0.47
DDX54-201ENST00000306014 SEC14L5O43304 696 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 OR4E1P0C645 316 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 POU3F3P20264 500 aaPredicted RBP12.1□□□□□ -0.47
DDX54-201ENST00000306014 NME2P22392 152 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 ZNF93P35789 620 aaPredicted RBP12.1□□□□□ -0.47
DDX54-201ENST00000306014 PPT1P50897 306 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 DCAF7P61962 342 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 EBPQ15125 230 aaKnown RBP12.1□□□□□ -0.47
DDX54-201ENST00000306014 ZNF529Q6P280 563 aa12.1□□□□□ -0.47
DDX54-201ENST00000306014 NHLRC1Q6VVB1 395 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms