RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 PRR23D1E9PI22 279 aaPredicted RBP4.9□□□□□ -1.63
VPS50-202ENST00000305866 H0YGG7 62 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 GPR31O00270 319 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 UBE2CO00762 179 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 GLCEO94923 617 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 NSA2O95478 260 aaKnown RBP4.9□□□□□ -1.63
VPS50-202ENST00000305866 IGHV4-34P06331 123 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 CD14P08571 375 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 CYC1P08574 325 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 PRR23D2P0DMB1 279 aaPredicted RBP4.9□□□□□ -1.63
VPS50-202ENST00000305866 ZNF3P17036 446 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 ALOX5APP20292 161 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 HSD17B7P56937 341 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 ARF3P61204 181 aaPredicted RBP4.9□□□□□ -1.63
VPS50-202ENST00000305866 CXADRP78310 365 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 SQSTM1Q13501 440 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 KCNAB1Q14722 419 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 NUMA1Q14980 2115 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 DAZAP2Q15038 168 aaPredicted RBP4.9□□□□□ -1.63
VPS50-202ENST00000305866 FAM74A1Q5RGS3 127 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 MTSS1LQ765P7 747 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 SLC16A9Q7RTY1 509 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 SPRED2Q7Z698 418 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 SLC35F3Q8IY50 421 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 PXT1Q8NFP0 134 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 OR10H4Q8NGA5 316 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 OR5AP2Q8NGF4 316 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 GLYATL2Q8WU03 294 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 SLC41A2Q96JW4 573 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 SMIM8Q96KF7 97 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 PTDSS2Q9BVG9 487 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 TLNRD1Q9H1K6 362 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 NDRG3Q9UGV2 375 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 V9GY05 133 aa4.9□□□□□ -1.63
VPS50-202ENST00000305866 OR52A4PA6NMU1 304 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 ZNF264O43296 627 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 BCL2L11O43521 198 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 AKR7A3O95154 331 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 NDUFB2O95178 105 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 IL33O95760 270 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 F13BP05160 661 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 PNMTP11086 282 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 AGAP20933 346 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 RFC3P40938 356 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 NPBWR1P48145 328 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 ART1P52961 327 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 ZP4Q12836 540 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 EIF2B5Q13144 721 aaKnown RBP4.89□□□□□ -1.63
VPS50-202ENST00000305866 SRSF5Q13243 272 aaKnown RBP4.89□□□□□ -1.63
VPS50-202ENST00000305866 UNC119Q13432 240 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 GPM6BQ13491 265 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 RBMS2Q15434 407 aaKnown RBP4.89□□□□□ -1.63
VPS50-202ENST00000305866 RNASE12Q5GAN4 147 aaKnown RBP4.89□□□□□ -1.63
VPS50-202ENST00000305866 C1orf100Q5SVJ3 147 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 PEG10Q86TG7 708 aaKnown RBP4.89□□□□□ -1.63
VPS50-202ENST00000305866 SLC25A42Q86VD7 318 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 TMEM229BQ8NBD8 167 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 OR5T2Q8NGG2 359 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 OR52L1Q8NGH7 329 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 RNF128Q8TEB7 428 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 FAM3CQ92520 227 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 PHF21AQ96BD5 680 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 C3orf49Q96BT1 292 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 PTCHD1Q96NR3 888 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 MESP1Q9BRJ9 268 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 NKX6-2Q9C056 277 aaPredicted RBP4.89□□□□□ -1.63
VPS50-202ENST00000305866 CD93Q9NPY3 652 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 TRPC4Q9UBN4 977 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 EML6Q6ZMW3 1958 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 A0A0A6YYH2 397 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 LOC101059948A0A1B0GTJ6 334 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 A0A1W2PPE3 182 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 A6NJ64 397 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 ACOT7O00154 380 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 ARL6IP5O75915 188 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 SNAPINO95295 136 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 ISG15P05161 165 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 PRKACAP17612 351 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 ZNF260Q3ZCT1 412 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 CLVS2Q5SYC1 327 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 NSUN5P2Q63ZY6 315 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 OR1S2Q8NGQ3 325 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 SNX33Q8WV41 574 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 LCN9Q8WX39 176 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 ADIPOR1Q96A54 375 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 RASD2Q96D21 266 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 MRGPRX1Q96LB2 322 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 ZFP3Q96NJ6 502 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 MOGAT1Q96PD6 335 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 TSPAN32Q96QS1 320 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 CNN2Q99439 309 aaKnown RBP4.89□□□□□ -1.63
VPS50-202ENST00000305866 G6PC2Q9NQR9 355 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 LANCL2Q9NS86 450 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 MRTO4Q9UKD2 239 aaKnown RBP4.89□□□□□ -1.63
VPS50-202ENST00000305866 PCSK5Q92824 1860 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 FRYLO94915 3013 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 IGLV3-32A0A0A0MS00 114 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 IGLV1-36A0A0B4J1U3 117 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 FRG2CA6NGY1 282 aa4.89□□□□□ -1.63
VPS50-202ENST00000305866 SULT1C2O00338 296 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms