RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ACKR4Q9NPB9 350 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 SIGLEC5O15389 551 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 PLPP2O43688 288 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 PNMTP11086 282 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 PI3P19957 117 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 CDKN2AP42771 156 aaKnown RBP12.78□□□□□ -0.36
SDC2-201ENST00000302190 TSFMP43897 325 aaKnown RBP12.78□□□□□ -0.36
SDC2-201ENST00000302190 IL13RA1P78552 427 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 SIGLEC14Q08ET2 396 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 ZIC1Q15915 447 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 C12orf45Q8N5I9 185 aaPredicted RBP12.78□□□□□ -0.36
SDC2-201ENST00000302190 OR6M1Q8NGM8 313 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 RNASE11Q8TAA1 199 aaKnown RBP12.78□□□□□ -0.36
SDC2-201ENST00000302190 C15orf40Q8WUR7 153 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 C3orf49Q96BT1 292 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 KTI12Q96EK9 354 aaPredicted RBP12.78□□□□□ -0.36
SDC2-201ENST00000302190 RSPO3Q9BXY4 272 aaPredicted RBP12.78□□□□□ -0.36
SDC2-201ENST00000302190 SERTAD3Q9UJW9 196 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 CES1P1Q9UKY3 287 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 SYT7O43581 403 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 PRH1P02810 166 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 ZNF425Q6IV72 752 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 STEAP1BQ6NZ63 245 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 NR2C2APQ86WQ0 139 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 DAZLQ92904 295 aaKnown RBP12.78□□□□□ -0.36
SDC2-201ENST00000302190 SELENOIQ9C0D9 397 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 KCNE5Q9UJ90 142 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 FBXO4Q9UKT5 387 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 GABARAPH6UMI1 98 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 TBX19O60806 448 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 FBLP22087 321 aaKnown RBP12.78□□□□□ -0.36
SDC2-201ENST00000302190 CCNOP22674 350 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 RAP2BP61225 183 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 EEF1A1P68104 462 aaKnown RBP12.78□□□□□ -0.36
SDC2-201ENST00000302190 GLO1Q04760 184 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 AIMP2Q13155 320 aaKnown RBP12.78□□□□□ -0.36
SDC2-201ENST00000302190 RBMS2Q15434 407 aaKnown RBP12.78□□□□□ -0.36
SDC2-201ENST00000302190 SLC9A3R2Q15599 337 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 FAM219AQ8IW50 185 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 C9orf62Q8N4C0 152 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 STEAP2Q8NFT2 490 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 OR51A4Q8NGJ6 313 aa12.78□□□□□ -0.36
SDC2-201ENST00000302190 A0A0B4J2E0 115 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 TEX13DA0A0J9YY54 714 aaPredicted RBP12.77□□□□□ -0.36
SDC2-201ENST00000302190 A0A1B0GX12 115 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 TMEM82A0PJX8 343 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 C17orf51A8MQB3 221 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 F5H5K5 113 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 G3V3Y1 287 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 PRAMEF26H0Y7S4 382 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 SSX5O60225 188 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 PRAF2O60831 178 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 ACTBP60709 375 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 ACTG1P63261 375 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 PHF19Q5T6S3 580 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 GSG1LQ6UXU4 331 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 Q6ZS52 159 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 TMPRSS11FQ6ZWK6 438 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 OR11H4Q8NGC9 324 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 SMIM4Q8WVI0 70 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 RADILQ96JH8 1075 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 BMFQ96LC9 184 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 OR1F2PQ96R84 312 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 SDHAF2Q9NX18 166 aa12.77□□□□□ -0.36
SDC2-201ENST00000302190 COA3Q9Y2R0 106 aaPredicted RBP12.77□□□□□ -0.36
SDC2-201ENST00000302190 AIPO00170 330 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 HCRTR1O43613 425 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 RAB40ALP0C0E4 278 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 DLSTP36957 453 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 TDGQ13569 410 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 GK2Q14410 553 aaPredicted RBP12.77□□□□□ -0.37
SDC2-201ENST00000302190 SLC25A24Q6NUK1 477 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 ABHD12BQ7Z5M8 362 aaPredicted RBP12.77□□□□□ -0.37
SDC2-201ENST00000302190 OR6V1Q8N148 313 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 OR4S1Q8NGB4 309 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 RAB40AQ8WXH6 277 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 PRSS27Q9BQR3 290 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 SLCO1C1Q9NYB5 712 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 EXOGQ9Y2C4 368 aaKnown RBP12.77□□□□□ -0.37
SDC2-201ENST00000302190 PRELID3BQ9Y3B1 194 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 GPR179Q6PRD1 2367 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 KIR2DS5A0A0G2JLQ3 304 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 A0A0G2JNG1 304 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 KIR2DS3K7RE56 304 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 P2RX1P51575 399 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 LUMP51884 338 aaPredicted RBP12.77□□□□□ -0.37
SDC2-201ENST00000302190 KIR2DS5Q14953 304 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 GSG1Q2KHT4 349 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 MDGA2Q7Z553 956 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 GKN2Q86XP6 184 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 CCDC36Q8IYA8 594 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 APOBEC4Q8WW27 367 aaKnown RBP12.77□□□□□ -0.37
SDC2-201ENST00000302190 STACQ99469 402 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 SDHAF3Q9NRP4 125 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 DZANK1Q9NVP4 752 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 MED29Q9NX70 200 aa12.77□□□□□ -0.37
SDC2-201ENST00000302190 hCG_1807616A0A1W2PRN6 198 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 C2CD4DB7Z1M9 353 aa12.76□□□□□ -0.37
SDC2-201ENST00000302190 CBX7O95931 251 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms