RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 FAM157CP0CG43 387 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 FOLR2P14207 255 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF44P15621 663 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 GABRA3P34903 492 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 PPT1P50897 306 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 SSBP1Q04837 148 aaKnown RBP9.85□□□□□ -0.83
ZNF558-201ENST00000301475 NKPD1Q17RQ9 610 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 TCEAL5Q5H9L2 206 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 NKAPLQ5M9Q1 402 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 LINC00114Q6XXX2 140 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 DPY19L2P2Q6ZN68 376 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 TMPPEQ6ZT21 453 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 BPIFB2Q8N4F0 458 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 VWCEQ96DN2 955 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 RRNAD1Q96FB5 475 aaKnown RBP9.85□□□□□ -0.83
ZNF558-201ENST00000301475 SEBOXQ9HB31 216 aaPredicted RBP9.85□□□□□ -0.83
ZNF558-201ENST00000301475 GHRLQ9UBU3 117 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 OR1A2Q9Y585 309 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 A0A0B4J2A0 478 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 LOC100289279A0A1B0GTE1 492 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 TVP23AA6NH52 213 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 ARPC3O15145 178 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 YKT6O15498 198 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 S100A9P06702 114 aaKnown RBP9.85□□□□□ -0.83
ZNF558-201ENST00000301475 TPT1P13693 172 aaKnown RBP9.85□□□□□ -0.83
ZNF558-201ENST00000301475 DDX6P26196 483 aaKnown RBP eCLIP9.85□□□□□ -0.83
ZNF558-201ENST00000301475 KIR3DL2P43630 455 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 PJVKQ0ZLH3 352 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 RUNX2Q13950 521 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 DEFB134Q4QY38 66 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF425Q6IV72 752 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 SLC16A9Q7RTY1 509 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 PARGQ86W56 976 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 BAP18Q8IXM2 172 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 PLPP7Q8NBV4 271 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 OR4S1Q8NGB4 309 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 GPR148Q8TDV2 347 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 GAL3ST3Q96A11 431 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 TRIM43Q96BQ3 446 aaPredicted RBP9.85□□□□□ -0.83
ZNF558-201ENST00000301475 ADAD1Q96M93 576 aaKnown RBP9.85□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF558Q96NG5 402 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 CYTL1Q9NRR1 136 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 SHPKQ9UHJ6 478 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 KLK13Q9UKR3 277 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 DTX4Q9Y2E6 619 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 VCANP13611 3396 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 EEF1E1-BLOC1S5C9J1V9 151 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF208O43345 1280 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 IGHV2-70P01814 119 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 TACSTD2P09758 323 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 CT62P0C5K7 136 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 PTAFRP25105 342 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 CFPP27918 469 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 ABCD3P28288 659 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 AQP2P41181 271 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 LBX1P52954 281 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 CXADRP78310 365 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 ELAVL1Q15717 326 aaKnown RBP9.84□□□□□ -0.83
ZNF558-201ENST00000301475 RAB11BQ15907 218 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 ALG11Q2TAA5 492 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 OTPQ5XKR4 325 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF627Q7L945 461 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 LYG2Q86SG7 212 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 TMEFF1Q8IYR6 380 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 CDRT4Q8N9R6 151 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 OR4K17Q8NGC6 315 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 RNF141Q8WVD5 230 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 SMARCD2Q92925 531 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 NAA11Q9BSU3 229 aaPredicted RBP9.84□□□□□ -0.83
ZNF558-201ENST00000301475 OR51M1Q9H341 326 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 MSRAQ9UJ68 235 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 FANCMQ8IYD8 2048 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 H7C1C5 153 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 SLC17A2O00624 439 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 AK1P00568 194 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 CXCL10P02778 98 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 ST6GAL1P15907 406 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 HLA-GP17693 338 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 SDHAP31040 664 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 MAP3K8P41279 467 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 AKR1C3P42330 323 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 F2RL1P55085 397 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 LCN6P62502 163 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 TSC22D1Q15714 1073 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF77Q15935 545 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 EIF2S3LQ2VIR3 472 aaKnown RBP9.84□□□□□ -0.83
ZNF558-201ENST00000301475 MOGAT2Q3SYC2 334 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 FAM166AQ6J272 317 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 LRRC69Q6ZNQ3 347 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 NAA40Q86UY6 237 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 SFTPA1Q8IWL2 248 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 EXD3Q8N9H8 876 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 TMEM52Q8NDY8 209 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 NUBPLQ8TB37 319 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 FAM174AQ8TBP5 190 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 RBM18Q96H35 190 aaKnown RBP9.84□□□□□ -0.83
ZNF558-201ENST00000301475 AMELYQ99218 206 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 ZDHHC4Q9NPG8 344 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 TMED7Q9Y3B3 224 aa9.84□□□□□ -0.83
ZNF558-201ENST00000301475 CSAG2Q9Y5P2 127 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms