RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 C21orf58P58505 322 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 AANATQ16613 207 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 Q6ZS52 159 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 OR2G2Q8NGZ5 317 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 ATOH1Q92858 354 aaPredicted RBP12.11□□□□□ -0.47
CASC4-201ENST00000299957 CXorf58Q96LI9 332 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 EDARQ9UNE0 448 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 DOCK4Q8N1I0 1966 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 hCG_1807616A0A1W2PRN6 198 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 ERCC1P07992 297 aaPredicted RBP12.11□□□□□ -0.47
CASC4-201ENST00000299957 ACSM4P0C7M7 580 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 GAAP10253 952 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 RAB6AP20340 208 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 NME2P22392 152 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 AKR1C3P42330 323 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 MAP2K6P52564 334 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 CLDN6P56747 220 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 MFSD13AQ14CX5 517 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 LPAL2Q16609 132 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 LGALSLQ3ZCW2 172 aaPredicted RBP12.11□□□□□ -0.47
CASC4-201ENST00000299957 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 MEX3BQ6ZN04 569 aaKnown RBP12.11□□□□□ -0.47
CASC4-201ENST00000299957 FAM57BQ71RH2 274 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 ETFBKMTQ8IXQ9 262 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 C9orf62Q8N4C0 152 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 OR6M1Q8NGM8 313 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 OR5H2Q8NGV7 314 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 CUTCQ9NTM9 273 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 OR5V1Q9UGF6 321 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 RNF215Q9Y6U7 377 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 KIF26BQ2KJY2 2108 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 FAM230AA0A1W2PPH8 454 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 SERTM1A2A2V5 107 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 PRAMEF26H0Y7S4 382 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 RGS13O14921 159 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 ICOSLGO75144 302 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 IFNGR1P15260 489 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 ZNF43P17038 809 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 HOXB9P17482 250 aaPredicted RBP12.11□□□□□ -0.47
CASC4-201ENST00000299957 CBX5P45973 191 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 TAS2R19P59542 299 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 FMODQ06828 376 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 DGAT2L6Q6ZPD8 337 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 TMED6Q8WW62 240 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 ZNF578Q96N58 590 aaPredicted RBP12.11□□□□□ -0.47
CASC4-201ENST00000299957 LMF2Q9BU23 707 aaKnown RBP12.11□□□□□ -0.47
CASC4-201ENST00000299957 PRR13Q9NZ81 148 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 GMEB2Q9UKD1 530 aa12.11□□□□□ -0.47
CASC4-201ENST00000299957 SNRNP200O75643 2136 aaKnown RBP12.1□□□□□ -0.47
CASC4-201ENST00000299957 DOCK7Q96N67 2140 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 TRIM64BA6NI03 449 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 LEUTXA8MZ59 168 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 COL9A1P20849 921 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 PEBP1P30086 187 aaKnown RBP12.1□□□□□ -0.47
CASC4-201ENST00000299957 AGTR1P30556 359 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 NUDT1P36639 197 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 BIDP55957 195 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 SNRPNP63162 240 aaKnown RBP12.1□□□□□ -0.47
CASC4-201ENST00000299957 PRTGQ2VWP7 1150 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 STX12Q86Y82 276 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 OR2L13Q8N349 312 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 C8orf44Q96CB5 159 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 LPAR4Q99677 370 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 STEAP1Q9UHE8 339 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 B9D1Q9UPM9 204 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 TMED7-TICAM2A0A0A6YYA0 188 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 A0A1W2PNR3 127 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 PLPP2O43688 288 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 RECKO95980 971 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 JMJD7P0C870 316 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 RGS19P49795 217 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 EBPQ15125 230 aaKnown RBP12.1□□□□□ -0.47
CASC4-201ENST00000299957 EXOSC6Q5RKV6 272 aaKnown RBP12.1□□□□□ -0.47
CASC4-201ENST00000299957 DUSP18Q8NEJ0 188 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 BAHD1Q8TBE0 780 aaPredicted RBP12.1□□□□□ -0.47
CASC4-201ENST00000299957 COX14Q96I36 57 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 C20orf24Q9BUV8 137 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.1□□□□□ -0.47
CASC4-201ENST00000299957 ZNF768Q9H5H4 540 aaKnown RBP12.1□□□□□ -0.47
CASC4-201ENST00000299957 MCCC2Q9HCC0 563 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 TMED7Q9Y3B3 224 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 HSPB6O14558 160 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 NXPH3O95157 252 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 EPPINO95925 133 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 SERPINA5P05154 406 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 PPP3CBP16298 524 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 OMGP23515 440 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 ZNF136P52737 540 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 OR1D5P58170 312 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 RBM39Q14498 530 aaKnown RBP12.1□□□□□ -0.47
CASC4-201ENST00000299957 TMEM176BQ3YBM2 270 aaPredicted RBP12.1□□□□□ -0.47
CASC4-201ENST00000299957 GIMAP5Q96F15 307 aa12.1□□□□□ -0.47
CASC4-201ENST00000299957 A0A087WV48 116 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 KIR2DS5A0A0G2JLQ3 304 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 A0A0G2JNG1 304 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 FAM221AA4D161 298 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 OR5K3A6NET4 321 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 KIR2DS3K7RE56 304 aa12.09□□□□□ -0.47
CASC4-201ENST00000299957 SPINT1O43278 529 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms