RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 SMARCD2Q92925 531 aa11.81□□□□□ -0.52
TVP23A-201ENST00000299866 DNAJA3Q96EY1 480 aa11.81□□□□□ -0.52
TVP23A-201ENST00000299866 FOXN4Q96NZ1 517 aa11.81□□□□□ -0.52
TVP23A-201ENST00000299866 CLCC1Q96S66 551 aa11.81□□□□□ -0.52
TVP23A-201ENST00000299866 TRIM2Q9C040 744 aa11.81□□□□□ -0.52
TVP23A-201ENST00000299866 MYO7AQ13402 2215 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 C1QTNF3-AMACRE9PGA6 284 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 BRINP1O60477 761 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 CD79AP11912 226 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 CMPK1P30085 196 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 GPR143P51810 404 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 PGDP52209 483 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 ADAM8P78325 824 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 PJVKQ0ZLH3 352 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 EIF2B1Q14232 305 aaKnown RBP11.8□□□□□ -0.52
TVP23A-201ENST00000299866 LPCAT3Q6P1A2 487 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 SLC16A9Q7RTY1 509 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 VN1R4Q7Z5H5 301 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 TMEM200AQ86VY9 491 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 SKA3Q8IX90 412 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 TMEM229BQ8NBD8 167 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 ZNF285Q96NJ3 590 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 SPSB2Q99619 263 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 NRIP2Q9BQI9 281 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 RHOFQ9HBH0 211 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 MMP26Q9NRE1 261 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 TMED7Q9Y3B3 224 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 OBSL1O75147 1896 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 F13BP05160 661 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 CT62P0C5K7 136 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 TLX1P31314 330 aaPredicted RBP11.8□□□□□ -0.52
TVP23A-201ENST00000299866 TMPPEQ6ZT21 453 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 ERN2Q76MJ5 926 aaKnown RBP11.8□□□□□ -0.52
TVP23A-201ENST00000299866 ANKRD33Q7Z3H0 272 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 OR4N2Q8NGD1 307 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 RSRP1Q9BUV0 290 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 NMNAT2Q9BZQ4 307 aa11.8□□□□□ -0.52
TVP23A-201ENST00000299866 MBNL1Q9NR56 388 aaKnown RBP11.8□□□□□ -0.52
TVP23A-201ENST00000299866 CGGBP1Q9UFW8 167 aaPredicted RBP11.8□□□□□ -0.52
TVP23A-201ENST00000299866 TRBV5-7A0A0A0MS05 114 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 TMEM235A6NFC5 223 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 PRRT4C9JH25 899 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 YKT6O15498 198 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 DOK2O60496 412 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 ZNF735P0CB33 412 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 APEHP13798 732 aaKnown RBP11.79□□□□□ -0.52
TVP23A-201ENST00000299866 F2RL1P55085 397 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 FAM53BQ14153 422 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 USP53Q70EK8 1073 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 LYG2Q86SG7 212 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 SFTPA1Q8IWL2 248 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 PRSS35Q8N3Z0 413 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 ZNF426Q9BUY5 554 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 WDR76Q9H967 626 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 CHMP1AQ9HD42 196 aaPredicted RBP11.79□□□□□ -0.52
TVP23A-201ENST00000299866 DUSP22Q9NRW4 184 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 RCC2Q9P258 522 aaKnown RBP11.79□□□□□ -0.52
TVP23A-201ENST00000299866 SLC22A13Q9Y226 551 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 NOSIPQ9Y314 301 aaKnown RBP11.79□□□□□ -0.52
TVP23A-201ENST00000299866 TRBV23OR9-2A0A075B6M9 112 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 C5orf52A6NGY3 159 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 PQBP1O60828 265 aaKnown RBP11.79□□□□□ -0.52
TVP23A-201ENST00000299866 SFTA3P0C7M3 94 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 CENPAP49450 140 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 EDARADDQ8WWZ3 215 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 ZC3H10Q96K80 434 aaKnown RBP11.79□□□□□ -0.52
TVP23A-201ENST00000299866 NAA11Q9BSU3 229 aaPredicted RBP11.79□□□□□ -0.52
TVP23A-201ENST00000299866 LAT2Q9GZY6 243 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 ACKR4Q9NPB9 350 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 DNAJB12Q9NXW2 375 aaKnown RBP11.79□□□□□ -0.52
TVP23A-201ENST00000299866 C9orf170A2RU37 121 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 DCDC2BA2VCK2 349 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 FGF17O60258 216 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 ABHD16AO95870 558 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 CD74P04233 296 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 ZNF44P15621 663 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 CPT2P23786 658 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 ZBTB25P24278 435 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 NNATQ16517 81 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 ZNF585AQ6P3V2 769 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 ULK3Q6PHR2 472 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 PARGQ86W56 976 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 ZNF595Q8IYB9 648 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 KREMEN2Q8NCW0 462 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 GAL3ST3Q96A11 431 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 PHB2Q99623 299 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 CMKLR1Q99788 373 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 OR51M1Q9H341 326 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 RPS10P5Q9NQ39 176 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 SMCO4Q9NRQ5 59 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 RNF186Q9NXI6 227 aa11.79□□□□□ -0.52
TVP23A-201ENST00000299866 YBX2Q9Y2T7 364 aaKnown RBP11.79□□□□□ -0.52
TVP23A-201ENST00000299866 ZNF14P17017 642 aaPredicted RBP11.78□□□□□ -0.52
TVP23A-201ENST00000299866 PSMB6P28072 239 aa11.78□□□□□ -0.52
TVP23A-201ENST00000299866 MAP3K8P41279 467 aa11.78□□□□□ -0.52
TVP23A-201ENST00000299866 CTXN1P60606 82 aa11.78□□□□□ -0.52
TVP23A-201ENST00000299866 MOGAT2Q3SYC2 334 aa11.78□□□□□ -0.52
TVP23A-201ENST00000299866 WDR38Q5JTN6 314 aa11.78□□□□□ -0.52
TVP23A-201ENST00000299866 GLYATL3Q5SZD4 288 aa11.78□□□□□ -0.52
TVP23A-201ENST00000299866 FHL5Q5TD97 284 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms