RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 CST2P09228 141 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 POU3F2P20265 443 aaPredicted RBP13.7□□□□□ -0.22
SCN3B-201ENST00000299333 TNFSF4P23510 183 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 AOAHP28039 575 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 SLC35A2P78381 396 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 LINC00299Q6ZSB3 139 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 ISL2Q96A47 359 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 CMTM3Q96MX0 182 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 CCNL2Q96S94 520 aaPredicted RBP13.7□□□□□ -0.22
SCN3B-201ENST00000299333 CORINQ9Y5Q5 1042 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 SUSD5O60279 629 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 HOXA11P31270 313 aaPredicted RBP13.7□□□□□ -0.22
SCN3B-201ENST00000299333 FCGR2CP31995 323 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 ECI1P42126 302 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 ENDOGQ14249 297 aaKnown RBP13.7□□□□□ -0.22
SCN3B-201ENST00000299333 CTU2Q2VPK5 515 aaKnown RBP13.7□□□□□ -0.22
SCN3B-201ENST00000299333 SLC16A14Q7RTX9 510 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 PTRH1Q86Y79 214 aaKnown RBP13.7□□□□□ -0.22
SCN3B-201ENST00000299333 ATF6BQ99941 703 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 GINS3Q9BRX5 216 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 SPNS1Q9H2V7 528 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 BET1LQ9NYM9 111 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 MCTS1Q9ULC4 181 aaKnown RBP13.7□□□□□ -0.22
SCN3B-201ENST00000299333 AIFM1O95831 613 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 C5AR1P21730 350 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 SUOXP51687 545 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 ISL1P61371 349 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 UBE2G1P62253 170 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 ZNF92Q03936 586 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 MZT1Q08AG7 82 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 ERV3-1Q14264 604 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 PRSS42Q7Z5A4 293 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 STT3BQ8TCJ2 826 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 RXFP4Q8TDU9 374 aa13.7□□□□□ -0.22
SCN3B-201ENST00000299333 A0A0J9YY10 115 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 SMAD6O43541 496 aaKnown RBP13.69□□□□□ -0.22
SCN3B-201ENST00000299333 ADAMTS4O75173 837 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 GPX5O75715 221 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 RPL7P18124 248 aaKnown RBP13.69□□□□□ -0.22
SCN3B-201ENST00000299333 KDF1Q8NAX2 398 aaPredicted RBP13.69□□□□□ -0.22
SCN3B-201ENST00000299333 PIGTQ969N2 578 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 NXF2Q9GZY0 626 aaKnown RBP13.69□□□□□ -0.22
SCN3B-201ENST00000299333 PISDQ9UG56 409 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 CHST2Q9Y4C5 530 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 GJB3O75712 270 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 ZNF573Q86YE8 665 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 MUTYHQ9UIF7 546 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 A0A1W2PPQ1 181 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 C1orf105O95561 183 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 GLI4P10075 376 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 DUSP1P28562 367 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 CDC20Q12834 499 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 PRSS35Q8N3Z0 413 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 OR6S1Q8NH40 331 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 ASB11Q8WXH4 323 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 ZNF566Q969W8 418 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 PRR14Q9BWN1 585 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 EVA1AQ9H8M9 152 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 UBTD1Q9HAC8 227 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 GDF2Q9UK05 429 aaPredicted RBP13.69□□□□□ -0.22
SCN3B-201ENST00000299333 PRAMEF4O60810 478 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 RPLP1P05386 114 aaKnown RBP13.69□□□□□ -0.22
SCN3B-201ENST00000299333 RAB5AP20339 215 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 GSK3AP49840 483 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 CLPPQ16740 277 aaPredicted RBP13.69□□□□□ -0.22
SCN3B-201ENST00000299333 CDONQ4KMG0 1287 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 CATSPERDQ86XM0 798 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 C11orf42Q8N5U0 333 aa13.69□□□□□ -0.22
SCN3B-201ENST00000299333 SERTM2A0A1B0GWG4 89 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 HEPACAM2A8MVW5 462 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 S100A7P31151 101 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 RAB13P51153 203 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 ABHD17BQ5VST6 288 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 TEX261Q6UWH6 196 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 ANGPTL5Q86XS5 388 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 C12orf76Q8N812 135 aaPredicted RBP13.68□□□□□ -0.22
SCN3B-201ENST00000299333 FBXW5Q969U6 566 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 U3KQ87 197 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 MBOAT4Q96T53 435 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 BANF2Q9H503 90 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 NARFLQ9H6Q4 476 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 K7ERU9 68 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 PSMB6P28072 239 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 CCKARP32238 428 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 GZMKP49863 264 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 CLDN17P56750 224 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 CLDN20P56880 219 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 SNRPGP62308 76 aaKnown RBP13.68□□□□□ -0.22
SCN3B-201ENST00000299333 SNRPNP63162 240 aaKnown RBP13.68□□□□□ -0.22
SCN3B-201ENST00000299333 ARG2P78540 354 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 DSC1Q08554 894 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 MFAP5Q13361 173 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 ZNF534Q76KX8 674 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 SLC35G3Q8N808 338 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 B3GALT5Q9Y2C3 310 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 STRAPQ9Y3F4 350 aaKnown RBP13.68□□□□□ -0.22
SCN3B-201ENST00000299333 YTHDF2Q9Y5A9 579 aaKnown RBP13.68□□□□□ -0.22
SCN3B-201ENST00000299333 A0A1B0GTW7 788 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 ZNF264O43296 627 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 GDF1P27539 372 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms