RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 DPY19L4Q7Z388 723 aa12.76□□□□□ -0.37
C9orf3-202ENST00000297979 MS4A15Q8N5U1 240 aa12.76□□□□□ -0.37
C9orf3-202ENST00000297979 GHSRQ92847 366 aa12.76□□□□□ -0.37
C9orf3-202ENST00000297979 DACT3Q96B18 629 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-202ENST00000297979 TXNDC15Q96J42 360 aa12.76□□□□□ -0.37
C9orf3-202ENST00000297979 KCNK17Q96T54 332 aa12.76□□□□□ -0.37
C9orf3-202ENST00000297979 PIGQQ9BRB3 760 aa12.76□□□□□ -0.37
C9orf3-202ENST00000297979 B3GNT3Q9Y2A9 372 aa12.76□□□□□ -0.37
C9orf3-202ENST00000297979 AHCTF1Q8WYP5 2266 aa12.76□□□□□ -0.37
C9orf3-202ENST00000297979 DOCK10Q96BY6 2186 aa12.76□□□□□ -0.37
C9orf3-202ENST00000297979 CDRT15L2A8MXV6 281 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 LINC01387J3KSC0 135 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 PSMD9O00233 223 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 PHYHO14832 338 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 SEC14L5O43304 696 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 PMS2P2O95744 297 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 TACSTD2P09758 323 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 ITGA3P26006 1051 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 SRD5A2P31213 254 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 TGM4P49221 684 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 ETFDHQ16134 617 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 ZNF239Q16600 458 aaKnown RBP12.75□□□□□ -0.37
C9orf3-202ENST00000297979 ABHD4Q8TB40 342 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 KIAA1143Q96AT1 154 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-202ENST00000297979 LRFN3Q9BTN0 628 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 LRFN1Q9P244 771 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 ABI3Q9P2A4 366 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 TRBV2A0A0J9YWF9 115 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 TAF4O00268 1085 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 DVL2O14641 736 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 CD1AP06126 327 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 OR8G3PP0DMU2 310 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 ALOX5APP20292 161 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 PSMB10P40306 273 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 CASRP41180 1078 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 BIDP55957 195 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 GLO1Q04760 184 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 C1orf122Q6ZSJ8 110 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 DTX1Q86Y01 620 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 OTOSQ8NHW6 89 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 FER1L6-AS2Q96M78 137 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 FOXN4Q96NZ1 517 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 PLEKHB1Q9UF11 243 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-202ENST00000297979 LRRC3CA6NJW4 275 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 AQP7P3A6NL99 342 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 CTDSP2O14595 271 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 SC5DO75845 299 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 KRT8P05787 483 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 RCVRNP35243 200 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 RPS27P42677 84 aaKnown RBP12.75□□□□□ -0.37
C9orf3-202ENST00000297979 EGR3Q06889 387 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 TMEM225Q6GV28 225 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 OR7E24Q6IFN5 339 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 FAM122CQ6P4D5 195 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 NHLRC1Q6VVB1 395 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 WDFY1Q8IWB7 410 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 HAVCR2Q8TDQ0 301 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 OXGR1Q96P68 337 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 DEPPQ9NTK1 212 aa12.75□□□□□ -0.37
C9orf3-202ENST00000297979 MRPL22Q9NWU5 206 aaKnown RBP12.75□□□□□ -0.37
C9orf3-202ENST00000297979 MRM2Q9UI43 246 aaKnown RBP12.75□□□□□ -0.37
C9orf3-202ENST00000297979 SHISA3A0PJX4 238 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 SMIM30A4D0T7 59 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 CENPBD1B2RD01 187 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 ZNF814B7Z6K7 855 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 ZNF593O00488 134 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-202ENST00000297979 SULT1C4O75897 302 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 F10P00742 488 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 SERPINA3P01011 423 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 PSKH1P11801 424 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 CD40LGP29965 261 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 CD96P40200 585 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 MTNR1BP49286 362 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 SSTP61278 116 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 ZNF45Q02386 682 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 FMODQ06828 376 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 CLEC2AQ6UVW9 174 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 CEACAM19Q7Z692 300 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 GPAT4Q86UL3 456 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 YIPF7Q8N8F6 280 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 CLEC1AQ8NC01 280 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 THEM6Q8WUY1 208 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 AP3S1Q92572 193 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 ITPKCQ96DU7 683 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 CEP19Q96LK0 163 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 WACQ9BTA9 647 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 PAQR5Q9NXK6 330 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-202ENST00000297979 KCNG2Q9UJ96 466 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 IKZF2Q9UKS7 526 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 CLEC4AQ9UMR7 237 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 COA3Q9Y2R0 106 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-202ENST00000297979 RGS5O15539 181 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 TRAF3IP2O43734 574 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-202ENST00000297979 ABHD16AO95870 558 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 CSRP1P21291 193 aaKnown RBP12.74□□□□□ -0.37
C9orf3-202ENST00000297979 CNR1P21554 472 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 PPP5CP53041 499 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 ADAM8P78325 824 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 HDDC2Q7Z4H3 204 aa12.74□□□□□ -0.37
C9orf3-202ENST00000297979 RPS4Y2Q8TD47 263 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms