RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 FAM117AQ9C073 453 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 MS4A7Q9GZW8 240 aaPredicted RBP12.3□□□□□ -0.44
HPS3-201ENST00000296051 LAMB2P55268 1798 aa12.3□□□□□ -0.44
HPS3-201ENST00000296051 CCDC163A0A0D9SF12 145 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 LEUTXA8MZ59 168 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 E9PI62 339 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 RAD51DO75771 328 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 OR8U9P0C7N5 309 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 GAAP10253 952 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 ATF1P18846 271 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 FXYD4P59646 89 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 RBM39Q14498 530 aaKnown RBP12.29□□□□□ -0.44
HPS3-201ENST00000296051 OR1N1Q8NGS0 311 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 NXF5Q9H1B4 397 aaKnown RBP12.29□□□□□ -0.44
HPS3-201ENST00000296051 CHRDQ9H2X0 955 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 CYSLTR2Q9NS75 346 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 EMC3Q9P0I2 261 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 BLACEA4D250 179 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 HIST1H1CP16403 213 aaKnown RBP12.29□□□□□ -0.44
HPS3-201ENST00000296051 NME2P22392 152 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 PRPS1P60891 318 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 SLC22A6Q4U2R8 563 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 OR10K2Q6IF99 312 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 LAS2Q8IYD9 372 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 CSNK2A3Q8NEV1 391 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 SFXN5Q8TD22 340 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 EPHX3Q9H6B9 360 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 RHBDD3Q9Y3P4 386 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 TCRBV16S1A1N1A0A5B0 115 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 HCRTR1O43613 425 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 TPT1P13693 172 aaKnown RBP12.29□□□□□ -0.44
HPS3-201ENST00000296051 BSGP35613 385 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 GZMMP51124 257 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 LINC00303Q3SY05 128 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 Q499Y3 187 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 SFRP5Q5T4F7 317 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 H3F3CQ6NXT2 135 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 ANKRD53Q8N9V6 530 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 FGF20Q9NP95 211 aaPredicted RBP12.29□□□□□ -0.44
HPS3-201ENST00000296051 B3GALT1Q9Y5Z6 326 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 LMO7DNF2Z398 122 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 ZNF264O43296 627 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 SYT7O43581 403 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 LANCL1O43813 399 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 PRKAR1BP31321 381 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 TAS2R19P59542 299 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 SIGLEC14Q08ET2 396 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 PRSS42Q7Z5A4 293 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 OR4D11Q8NGI4 311 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 OR8D4Q8NGM9 314 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 HOXB13Q92826 284 aaPredicted RBP12.29□□□□□ -0.44
HPS3-201ENST00000296051 KCNS2Q9ULS6 477 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 EMC9Q9Y3B6 208 aa12.29□□□□□ -0.44
HPS3-201ENST00000296051 ATAD5Q96QE3 1844 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 ZNF850A8MQ14 1090 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 PRRG2O14669 202 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 TRA2BP62995 288 aaKnown RBP12.28□□□□□ -0.44
HPS3-201ENST00000296051 TNK1Q13470 666 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 PXKQ7Z7A4 578 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 KDM8Q8N371 416 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 OR7G2Q8NG99 324 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 ANGPTL6Q8NI99 470 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 TCEAL3Q969E4 200 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 WDR89Q96FK6 387 aaPredicted RBP12.28□□□□□ -0.44
HPS3-201ENST00000296051 HINT2Q9BX68 163 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 PIKFYVEQ9Y2I7 2098 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 TRGV8A0A0C4DH27 118 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 SPTY2D1-AS1A0A0U1RR47 76 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 TSPAN11A1L157 253 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 GLYATL3Q5SZD4 288 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 LYSMD1Q96S90 227 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 VSX1Q9NZR4 365 aaPredicted RBP12.28□□□□□ -0.44
HPS3-201ENST00000296051 REV1Q9UBZ9 1251 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 SERGEFQ9UGK8 458 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 DUSP13Q9UII6 198 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.28□□□□□ -0.44
HPS3-201ENST00000296051 GABARAPH6UMI1 98 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 CTNSO60931 367 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 CRTAPO75718 401 aaPredicted RBP12.28□□□□□ -0.44
HPS3-201ENST00000296051 PAPLNO95428 1278 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 PRPH2P23942 346 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 REEP5Q00765 189 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 PEA15Q15121 130 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 AGBL4Q5VU57 503 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 AAED1Q7RTV5 226 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 C17orf47Q8NEP4 570 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 OR5H2Q8NGV7 314 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 SDF2Q99470 211 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 H7C417 338 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 PLRG1O43660 514 aaKnown RBP12.28□□□□□ -0.44
HPS3-201ENST00000296051 MED6O75586 246 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 CTSLP07711 333 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 PET100P0DJ07 73 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 GABREP78334 506 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 ZNF628Q5EBL2 1059 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 TMEM92Q6UXU6 159 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 MED25Q71SY5 747 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 ABHD12BQ7Z5M8 362 aaPredicted RBP12.28□□□□□ -0.44
HPS3-201ENST00000296051 THRSPQ92748 146 aa12.28□□□□□ -0.44
HPS3-201ENST00000296051 LCORQ96JN0 433 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms