RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 WNK2Q9Y3S1 2297 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 A6NDN8 102 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 TOMM34Q15785 309 aaPredicted RBP10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 COL5A1-AS1Q5SY13 56 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 TMPPEQ6ZT21 453 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 EXD3Q8N9H8 876 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 SOCS4Q8WXH5 440 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 CASD1Q96PB1 797 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 MRPS28Q9Y2Q9 187 aaKnown RBP10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 NDUFS1P28331 727 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 MUTYHQ9UIF7 546 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 EMC9Q9Y3B6 208 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 ZNF600Q6ZNG1 722 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 MRPL21Q7Z2W9 205 aaKnown RBP10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 HRASLS5Q96KN8 279 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 PCED1AQ9H1Q7 454 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 MSRAQ9UJ68 235 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 PADI1Q9ULC6 663 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 B3GALT5Q9Y2C3 310 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 LMO7Q8WWI1 1683 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 DAOP14920 347 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 VRK2Q86Y07 508 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 SCAMP4Q969E2 229 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 NIPSNAP1Q9BPW8 284 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 CPPED1Q9BRF8 314 aaPredicted RBP10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 LTB4R2Q9NPC1 389 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 CUTCQ9NTM9 273 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 M0R2Z0 102 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 XRCC2O43543 280 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 RXRBP28702 533 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 CRABP1P29762 137 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 KCNJ3P48549 501 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 GNG10P50151 68 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 OR1Q1Q15612 314 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 ZNF547Q8IVP9 402 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 OR6K3Q8NGY3 331 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 MAGT1Q9H0U3 335 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 PTPRUQ92729 1446 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 GEMIN2O14893 280 aaKnown RBP10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 PLRG1O43660 514 aaKnown RBP10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 SPINK4O60575 86 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 TSPAN12O95859 305 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 DDAH2O95865 285 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 ZNF888P0CJ79 500 aaPredicted RBP10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 OR5M1Q8NGP8 315 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 C1orf226A1L170 272 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 SNRPGP62308 76 aaKnown RBP10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 HLXQ14774 488 aaPredicted RBP10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 GPRIN2O60269 458 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 CD79AP11912 226 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 HAAOP46952 286 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 RFX2P48378 723 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 DAP3P51398 398 aaKnown RBP10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 ERVFC1-1P60608 527 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 TIGD5Q53EQ6 642 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 PSMF1Q92530 271 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 GPA33Q99795 319 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 ROBO1Q9Y6N7 1651 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 SLC25A6P12236 298 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 FCGR2AP12318 317 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 TMEM115Q12893 351 aaPredicted RBP10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 BAP18Q8IXM2 172 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 AMBRA1Q9C0C7 1298 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 VGLL4Q14135 290 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 CATSPERDQ86XM0 798 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 CLEC1AQ8NC01 280 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 OR1J2Q8NGS2 313 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 EDEM2Q9BV94 578 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 IGLV3-22A0A075B6J6 115 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 GABARAPH6UMI1 98 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 DTYMKP23919 212 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 ASB17Q8WXJ9 295 aa10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 ZNF689Q96CS4 500 aaPredicted RBP10.86□□□□□ -0.67
SHROOM3-201ENST00000296043 ZNF814B7Z6K7 855 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 C5orf46Q6UWT4 87 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 TANKQ92844 425 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 ACTR3CQ9C0K3 210 aaPredicted RBP10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 ZNF593O00488 134 aaPredicted RBP10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 IRF2P14316 349 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 DCTDP32321 178 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 VIPR2P41587 438 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 VASPP50552 380 aaPredicted RBP10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 C2orf27AQ580R0 203 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 FA2HQ7L5A8 372 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 KIAA1217Q5T5P2 1943 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 OR2J2O76002 312 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 C4AP0C0L4 1744 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 C4BP0C0L5 1744 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 IAPPP10997 89 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 ELAVL4P26378 380 aaKnown RBP10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 SLC35A1P78382 337 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 TIGITQ495A1 244 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 GOT1L1Q8NHS2 421 aaPredicted RBP10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 DRD2P14416 443 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 MOB3CQ70IA8 216 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 ISOC2Q96AB3 205 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 NPY6RQ99463 290 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 LHX6Q9UPM6 363 aa10.85□□□□□ -0.67
SHROOM3-201ENST00000296043 CXorf65A6NEN9 183 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms