RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 INPP1P49441 399 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 P2RY4P51582 365 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 SELENBP1Q13228 472 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 SLC25A35Q3KQZ1 300 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 ZNF544Q6NX49 715 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 NRARPQ7Z6K4 114 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 HSD17B8Q92506 261 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 SLITRK2Q9H156 845 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 FRRS1LQ9P0K9 344 aa8.19□□□□□ -1.1
PDPN-201ENST00000294489 TMEM212A6NML5 194 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 BOLA2-SMG1P6H3BVE0 249 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 ZNF823P16415 610 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 NPR2P20594 1047 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 RBMS1P29558 406 aaKnown RBP8.18□□□□□ -1.1
PDPN-201ENST00000294489 DSCR4P56555 118 aaPredicted RBP8.18□□□□□ -1.1
PDPN-201ENST00000294489 P2RY14Q15391 338 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 MEP1BQ16820 701 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 Q499Y3 187 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 ACER2Q5QJU3 275 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 ZNF679Q8IYX0 411 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 ZNF676Q8N7Q3 588 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 ZNF454Q8N9F8 522 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 OR2G2Q8NGZ5 317 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 MAP6Q96JE9 813 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 FOXN4Q96NZ1 517 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 OR5B2Q96R09 309 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 OR8B4Q96RC9 309 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 COL25A1Q9BXS0 654 aaPredicted RBP8.18□□□□□ -1.1
PDPN-201ENST00000294489 ZCCHC4Q9H5U6 513 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 TMEM185BQ9H7F4 350 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 ASCL3Q9NQ33 180 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 HPF1Q9NWY4 346 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 SLCO1C1Q9NYB5 712 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 COA3Q9Y2R0 106 aaPredicted RBP8.18□□□□□ -1.1
PDPN-201ENST00000294489 AK6Q9Y3D8 172 aaKnown RBP8.18□□□□□ -1.1
PDPN-201ENST00000294489 TTC28Q96AY4 2481 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 DOCK10Q96BY6 2186 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 LOC102725191A0A1B0GVB3 256 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 ACOD1A6NK06 481 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 ZIC3O60481 467 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 TMEM127O75204 238 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 ETFDHQ16134 617 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 ZNF671Q8TAW3 534 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 THRSPQ92748 146 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 RNF166Q96A37 237 aaPredicted RBP8.18□□□□□ -1.1
PDPN-201ENST00000294489 DCBLD2Q96PD2 775 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 DERL3Q96Q80 235 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 KCNK17Q96T54 332 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.18□□□□□ -1.1
PDPN-201ENST00000294489 ELOVL3Q9HB03 270 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 TCF7L1Q9HCS4 588 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 BRD7Q9NPI1 651 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 MRPL22Q9NWU5 206 aaKnown RBP8.18□□□□□ -1.1
PDPN-201ENST00000294489 KLHL13Q9P2N7 655 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 ING1Q9UK53 422 aaPredicted RBP8.18□□□□□ -1.1
PDPN-201ENST00000294489 HDGFL3Q9Y3E1 203 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 SPAARA0A1B0GVQ0 90 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 KHDRBS3O75525 346 aaKnown RBP8.18□□□□□ -1.1
PDPN-201ENST00000294489 PAHP00439 452 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 PITPNBP48739 271 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 OR2B6P58173 313 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 EIF2B1Q14232 305 aaKnown RBP8.18□□□□□ -1.1
PDPN-201ENST00000294489 SLC17A1Q14916 467 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 TIGD3Q6B0B8 471 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 LRRN1Q6UXK5 716 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 KRT77Q7Z794 578 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 SYT9Q86SS6 491 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 UEVLDQ8IX04 471 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 OR5M1Q8NGP8 315 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 ADAMTS14Q8WXS8 1223 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 RBP7Q96R05 134 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 MED29Q9NX70 200 aa8.18□□□□□ -1.1
PDPN-201ENST00000294489 MRPS18BQ9Y676 258 aaKnown RBP8.18□□□□□ -1.1
PDPN-201ENST00000294489 ANKRD61A6NGH8 418 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 CBR3O75828 277 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 HLA-DQB1P01920 261 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 RAF1P04049 648 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 EIF4EP06730 217 aaKnown RBP8.17□□□□□ -1.1
PDPN-201ENST00000294489 ATF1P18846 271 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 RIDAP52758 137 aaKnown RBP8.17□□□□□ -1.1
PDPN-201ENST00000294489 BIDP55957 195 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 SOX8P57073 446 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 ROM1Q03395 351 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 CEP78Q5JTW2 689 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 TMEM225Q6GV28 225 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 MZT2BQ6NZ67 158 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 LRRC69Q6ZNQ3 347 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 HDDC2Q7Z4H3 204 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 ZNF433Q8N7K0 673 aaPredicted RBP8.17□□□□□ -1.1
PDPN-201ENST00000294489 OR1J4Q8NGS1 313 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 GPR148Q8TDV2 347 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 RGP1Q92546 391 aaPredicted RBP8.17□□□□□ -1.1
PDPN-201ENST00000294489 AMELYQ99218 206 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 B3GAT2Q9NPZ5 323 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 OR4C45A6NMZ5 311 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 PIN1P1O15428 100 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 SSX4O60224 188 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 OPN1LWP04000 364 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 PRKAR1AP10644 381 aa8.17□□□□□ -1.1
PDPN-201ENST00000294489 CEACAM1P13688 526 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms