RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 HRH3Q9Y5N1 445 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR2F2O95006 317 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 S100A8P05109 93 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 CEACAM1P13688 526 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 ECI1P42126 302 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 DCAF7P61962 342 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 PDZK1IP1Q13113 114 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR2F1Q13607 317 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 EXOSC7Q15024 291 aaKnown RBP10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 C5orf46Q6UWT4 87 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 TAAR8Q969N4 342 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 GPR78Q96P69 363 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 TSSK2Q96PF2 358 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 TNFRSF13CQ96RJ3 184 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 METTL9Q9H1A3 318 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 VSX1Q9NZR4 365 aaPredicted RBP10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 STEAP1Q9UHE8 339 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 STMND1H3BQB6 276 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 SULT2B1O00204 365 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 IMPA2O14732 288 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 LDB3O75112 727 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 SCAF4O95104 1147 aaKnown RBP10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 IGHG1P01857 330 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 NAGAP17050 411 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 SERPINA2P20848 420 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 PTGER1P34995 402 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 SCGB2A2Q13296 93 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 HYAL4Q2M3T9 481 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR4Q3Q8NH05 313 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 PDXPQ96GD0 296 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 TEX37Q96LM6 180 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 ADOQ96SZ5 270 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 WDR83Q9BRX9 315 aaKnown RBP10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 GABARAPL3Q9BY60 117 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 NXF5Q9H1B4 397 aaKnown RBP10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 UBQLN3Q9H347 655 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 WDR76Q9H967 626 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 CDH20Q9HBT6 801 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 UFSP2Q9NUQ7 469 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 NDUFB11Q9NX14 153 aa10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 PURGQ9UJV8 347 aaKnown RBP10.86□□□□□ -0.67
SYNGAP1-201ENST00000293748 A0A0A6YYC8 382 aaPredicted RBP10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 C20orf202A1L168 122 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 I3L1I5 382 aaPredicted RBP10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 RAB4AP20338 218 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 SFTPDP35247 375 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 HBG1P69891 147 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 HBG2P69892 147 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 SYT14P1Q58G82 188 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 Q6ZTK2 550 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 NKAIN3Q8N8D7 197 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR13C9Q8NGT0 318 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR10Z1Q8NGY1 313 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 SDSLQ96GA7 329 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 SLC41A2Q96JW4 573 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 SMIM14Q96QK8 99 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 CUTCQ9NTM9 273 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 GPX5O75715 221 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 CD53P19397 219 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 MAKP20794 623 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 XCR1P46094 333 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 MRPS34P82930 218 aaKnown RBP10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 ALKBH1Q13686 389 aaKnown RBP10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 KIAA0141Q14154 515 aaPredicted RBP10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 IAH1Q2TAA2 248 aaPredicted RBP10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 PDLIM3Q53GG5 364 aaPredicted RBP10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 SLC35D3Q5M8T2 416 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 HEPHL1Q6MZM0 1159 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 HIST2H3AQ71DI3 136 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 OVCH1Q7RTY7 1134 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR52H1Q8NGJ2 320 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 SLCO4A1Q96BD0 722 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 DCLRE1CQ96SD1 692 aaKnown RBP10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR11A1Q9GZK7 315 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 FSCN3Q9NQT6 498 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 MUC6Q6W4X9 2439 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 LOC100289279A0A1B0GTE1 492 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 TMEM202A6NGA9 273 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 KDM4EB2RXH2 506 aaPredicted RBP10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 PAN3Q58A45 887 aaKnown RBP10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 SLC22A24Q8N4F4 322 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 OR2I1PQ8NGU4 316 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 CPNE4Q96A23 557 aaPredicted RBP10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 FAM3DQ96BQ1 224 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 SLC25A32Q9H2D1 315 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 SGK494L7N484 410 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 GALR3O60755 368 aaPredicted RBP10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 WNT1P04628 370 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 F3P13726 295 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 MMP11P24347 488 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 NDUFA6P56556 154 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 COX20Q5RI15 118 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 SAXO2Q658L1 398 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 DPY19L2P2Q6ZN68 376 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 RDH10Q8IZV5 341 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 ZNF680Q8NEM1 530 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 CHTF18Q8WVB6 975 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 GCDHQ92947 438 aaPredicted RBP10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 LRRC61Q9BV99 259 aa10.85□□□□□ -0.67
SYNGAP1-201ENST00000293748 C1QTNF3Q9BXJ4 246 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms