RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 LIPCP11150 499 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 ADH6P28332 368 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 RAG2P55895 527 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 RPS11P62280 158 aaKnown RBP eCLIP15.1■□□□□ 0.01
CPSF4-201ENST00000292476 SLC25A35Q3KQZ1 300 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 EMC4Q5J8M3 183 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 CEP78Q5JTW2 689 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 FAM69AQ5T7M9 428 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 MAMDC2Q7Z304 686 aaPredicted RBP15.1■□□□□ 0.01
CPSF4-201ENST00000292476 ADGRG3Q86Y34 549 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 CLEC1AQ8NC01 280 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 ZNF248Q8NDW4 579 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 DDIT4LQ96D03 193 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 DPAGT1Q9H3H5 408 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 MARCH7Q9H992 704 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 CAMK2AQ9UQM7 478 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 NUBP2Q9Y5Y2 271 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 HEATR5AQ86XA9 2040 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 ZFHX4Q86UP3 3567 aa15.1■□□□□ 0.01
CPSF4-201ENST00000292476 ARPC4-TTLL3A0A0A6YYG9 625 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 TRBV2A0A0J9YWF9 115 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 AHSA1O95433 338 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 P04436 131 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 ASAH2BP0C7U1 165 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 EDNRAP25101 427 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 CASRP41180 1078 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 EGR4Q05215 589 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 Q0VFX4 171 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 DCAF10Q5QP82 559 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 OR5M10Q6IEU7 315 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 OR2M3Q8NG83 312 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 KCNE4Q8WWG9 221 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 ZBTB8AQ96BR9 441 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 THOC3Q96J01 351 aaKnown RBP15.09■□□□□ 0.01
CPSF4-201ENST00000292476 ABHD1Q96SE0 405 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 MNTQ99583 582 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 SH2D2AQ9NP31 389 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 C2orf72A6NCS6 295 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 LRRN3E7EW58 273 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 RRP8O43159 456 aaKnown RBP15.09■□□□□ 0.01
CPSF4-201ENST00000292476 ARHGEF9O43307 516 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 NPIPB7O75200 414 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 PAHP00439 452 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 CD14P08571 375 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 TFPIP10646 304 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 ATF1P18846 271 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 BTCP35070 178 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 NAA10P41227 235 aaPredicted RBP15.09■□□□□ 0.01
CPSF4-201ENST00000292476 CYB561P49447 251 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 AGFG1P52594 562 aaKnown RBP15.09■□□□□ 0.01
CPSF4-201ENST00000292476 RRADP55042 308 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 DYRK1AQ13627 763 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 UBE2NLQ5JXB2 153 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 ZNF684Q5T5D7 378 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 C1orf140Q5VVS0 124 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 NANOGNBQ7Z5D8 188 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 GLCCI1Q86VQ1 547 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 RFLNBQ8N5W9 214 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 FADS6Q8N9I5 356 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 KTI12Q96EK9 354 aaPredicted RBP15.09■□□□□ 0.01
CPSF4-201ENST00000292476 TMEM41AQ96HV5 264 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 ACOXLQ9NUZ1 547 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 GNG8Q9UK08 70 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 ADAM18Q9Y3Q7 739 aa15.09■□□□□ 0.01
CPSF4-201ENST00000292476 OR6C68A6NDL8 312 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 HSPB2A8KAH6 182 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 EEF1E1O43324 174 aaKnown RBP15.08■□□□□ 0
CPSF4-201ENST00000292476 LANCL1O43813 399 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 HSPB2Q16082 182 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 SLC36A2Q495M3 483 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 LINC01590Q5TEZ4 76 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 ABHD17BQ5VST6 288 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 POMZP3Q6PJE2 187 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 LRRC69Q6ZNQ3 347 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 SLC16A9Q7RTY1 509 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 FAM122BQ7Z309 247 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 LRRC17Q8N6Y2 441 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 EXD3Q8N9H8 876 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 LRRC75AQ8NAA5 344 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 OR1J4Q8NGS1 313 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 YIPF5Q969M3 257 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 TAAR8Q969N4 342 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 SCMH1Q96GD3 660 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 NMNAT3Q96T66 252 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 POTEKPQ9BYX7 375 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 STMN3Q9NZ72 180 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 PTTG3PQ9NZH4 202 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 ZNF281Q9Y2X9 895 aa15.08■□□□□ 0
CPSF4-201ENST00000292476 AHCTF1Q8WYP5 2266 aa15.07■□□□□ 0
CPSF4-201ENST00000292476 A0A087WV48 116 aa15.07■□□□□ 0
CPSF4-201ENST00000292476 TMEM72A0PK05 275 aa15.07■□□□□ 0
CPSF4-201ENST00000292476 BLOC1S5-TXNDC5H3BN57 136 aa15.07■□□□□ 0
CPSF4-201ENST00000292476 KLK10O43240 276 aa15.07■□□□□ 0
CPSF4-201ENST00000292476 TPPPO94811 219 aa15.07■□□□□ 0
CPSF4-201ENST00000292476 TACSTD2P09758 323 aa15.07■□□□□ 0
CPSF4-201ENST00000292476 SDHAP31040 664 aa15.07■□□□□ 0
CPSF4-201ENST00000292476 UQCRC1P31930 480 aa15.07■□□□□ 0
CPSF4-201ENST00000292476 DSCR4P56555 118 aaPredicted RBP15.07■□□□□ 0
CPSF4-201ENST00000292476 TGIF1Q15583 401 aa15.07■□□□□ 0
CPSF4-201ENST00000292476 PLPPR5Q32ZL2 321 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms