RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 HOXC5Q00444 222 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 DPY19L4Q7Z388 723 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 GOT1L1Q8NHS2 421 aaPredicted RBP16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 ARRDC3Q96B67 414 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 DEFB110Q30KQ9 67 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 CMTM4Q8IZR5 234 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 BBS1Q8NFJ9 593 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 RSPRY1Q96DX4 576 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 TCTN2Q96GX1 697 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 INSM2Q96T92 566 aaPredicted RBP16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 GFYI3L273 518 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 CTSLP07711 333 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 CRYBB2P43320 205 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 CDK5R1Q15078 307 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 SLC48A1Q6P1K1 146 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 BRICD5Q6PL45 260 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 PRSS45Q7RTY3 260 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 TMEM255BQ8WV15 326 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 C1orf198Q9H425 327 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 SPACA1Q9HBV2 294 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 SLC39A9Q9NUM3 307 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 NDUFB6O95139 128 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 EGR3Q06889 387 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 MOGAT2Q3SYC2 334 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 NECAP2Q9NVZ3 263 aa16.09■□□□□ 0.17
PCDHA13-201ENST00000289272 SLC5A10A0PJK1 596 aa16.08■□□□□ 0.17
PCDHA13-201ENST00000289272 EXOSC6Q5RKV6 272 aaKnown RBP16.08■□□□□ 0.17
PCDHA13-201ENST00000289272 ACSM5Q6NUN0 579 aa16.08■□□□□ 0.17
PCDHA13-201ENST00000289272 BCDIN3DQ7Z5W3 292 aaKnown RBP16.08■□□□□ 0.17
PCDHA13-201ENST00000289272 ST8SIA3O43173 380 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 IGHG1P01857 330 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 DUSP1P28562 367 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 ZNF628Q5EBL2 1059 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 FAM111BQ6SJ93 734 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 ZNF576Q9H609 170 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 ZNF275Q9NSD4 429 aaPredicted RBP16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 CHST2Q9Y4C5 530 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 E5RGE8 158 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 CTDSPLO15194 276 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 MT-ATP6P00846 226 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 H2AFB1P0C5Y9 115 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 SLC22A6Q4U2R8 563 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 PRSS36Q5K4E3 855 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 FAM162BQ5T6X4 162 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 OR7E24Q6IFN5 339 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 C8orf82Q6P1X6 216 aaPredicted RBP16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 NSG2Q9Y328 171 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 SSC5DA1L4H1 1573 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 TRAV36DV7A0A075B6V5 113 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 A0A087WUU8 490 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 C17orf105B2RV13 164 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 FAM227AF5H4B4 570 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 M0QYG6 137 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 CTRB1P17538 263 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 OTX2P32243 289 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 RAB38P57729 211 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 CTRB2Q6GPI1 263 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 ZNF595Q8IYB9 648 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 ZNF740Q8NDX6 193 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 ELSPBP1Q96BH3 223 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 DCBLD2Q96PD2 775 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 ADAM19Q9H013 955 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 CHRDQ9H2X0 955 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 MOB1AQ9H8S9 216 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 FN3KRPQ9HA64 309 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 ASB1Q9Y576 335 aa16.08■□□□□ 0.16
PCDHA13-201ENST00000289272 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 CD80P33681 288 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 DIO1P49895 249 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 HLXQ14774 488 aaPredicted RBP16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 MFSD12Q6NUT3 480 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 BCAT2O15382 392 aaPredicted RBP16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 XRCC3O43542 346 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 GATCO43716 136 aaKnown RBP16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 DEFB133Q30KQ1 61 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 FAM209AQ5JX71 171 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 MANEAQ5SRI9 462 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 C11orf87Q6NUJ2 197 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 CD300LDQ6UXZ3 194 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 MSI2Q96DH6 328 aaKnown RBP16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 TAAR2Q9P1P5 351 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 HS3ST3A1Q9Y663 406 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 A0A1B0GWA3 101 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 EPXP11678 715 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 NPPBP16860 134 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 RAB5AP20339 215 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 CLDN2P57739 230 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 MLF2Q15773 248 aaPredicted RBP16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 CARD17Q5XLA6 110 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 KIAA0907Q7Z7F0 614 aaPredicted RBP16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 ZNF761Q86XN6 746 aaPredicted RBP16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 C2orf50Q96LR7 162 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 DUSP22Q9NRW4 184 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 SERINC4A6NH21 518 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 RPA2P15927 270 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 COL5A3P25940 1745 aaPredicted RBP16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 PCBD1P61457 104 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 ZNF836Q6ZNA1 936 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 Q6ZRG5 221 aa16.07■□□□□ 0.16
PCDHA13-201ENST00000289272 NUDT8Q8WV74 236 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms