RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ZNF764Q96H86 408 aaPredicted RBP12.19□□□□□ -0.46
SCAF4-201ENST00000286835 HTTP42858 3142 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 CALCBP10092 127 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 RNH1P13489 461 aaKnown RBP12.18□□□□□ -0.46
SCAF4-201ENST00000286835 NHLRC3Q5JS37 347 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 GABRG1Q8N1C3 465 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 OR2G2Q8NGZ5 317 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 UBE2ZQ9H832 354 aaPredicted RBP12.18□□□□□ -0.46
SCAF4-201ENST00000286835 EDARQ9UNE0 448 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 A0A1B0GV50 99 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 PGAM2P15259 253 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 DPP4P27487 766 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 RIDAP52758 137 aaKnown RBP12.18□□□□□ -0.46
SCAF4-201ENST00000286835 PPP2CBP62714 309 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 PPP2CAP67775 309 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 MRPS21P82921 87 aaKnown RBP12.18□□□□□ -0.46
SCAF4-201ENST00000286835 FGL1Q08830 312 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 FZD5Q13467 585 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 ZNF273Q14593 569 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 SWI5Q1ZZU3 235 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 TMEM196Q5HYL7 178 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 MARCH3Q86UD3 253 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 SFTPA2Q8IWL1 248 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 OR10R2Q8NGX6 335 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 C10orf90Q96M02 699 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 ADAT1Q9BUB4 502 aaKnown RBP12.18□□□□□ -0.46
SCAF4-201ENST00000286835 SEC61A2Q9H9S3 476 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 OBP2AQ9NY56 170 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 LAMTOR5O43504 91 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 SFTPBP07988 381 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 MNX1P50219 401 aaPredicted RBP12.18□□□□□ -0.46
SCAF4-201ENST00000286835 CEBPGP53567 150 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 ZNF658BQ4V348 819 aaPredicted RBP12.18□□□□□ -0.46
SCAF4-201ENST00000286835 SLC16A9Q7RTY1 509 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 FAM219AQ8IW50 185 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 SPICQ8N5J4 248 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 EID2Q8N6I1 236 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 STACQ99469 402 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 MENTQ9BUN1 341 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 DNAJB12Q9NXW2 375 aaKnown RBP12.18□□□□□ -0.46
SCAF4-201ENST00000286835 CEP250Q9BV73 2442 aa12.18□□□□□ -0.46
SCAF4-201ENST00000286835 FAM74A7A6NL05 159 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 PTP4A3O75365 173 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 UBBP0CG47 229 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 UBCP0CG48 685 aaKnown RBP12.17□□□□□ -0.46
SCAF4-201ENST00000286835 TACR3P29371 465 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 AVPR2P30518 371 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 RPS27AP62979 156 aaKnown RBP12.17□□□□□ -0.46
SCAF4-201ENST00000286835 UBA52P62987 128 aaKnown RBP12.17□□□□□ -0.46
SCAF4-201ENST00000286835 FAM74A3Q4VXF1 159 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 CLVS2Q5SYC1 327 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 ZSCAN1Q8NBB4 408 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 AVL9Q8NBF6 648 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 BPIFCQ8NFQ6 507 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 THAP3Q8WTV1 239 aaPredicted RBP12.17□□□□□ -0.46
SCAF4-201ENST00000286835 MOGAT1Q96PD6 335 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 TIMP4Q99727 224 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 MRI1Q9BV20 369 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 FBRSQ9HAH7 460 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 FRRS1LQ9P0K9 344 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 ETV7Q9Y603 341 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 KCNMB2Q9Y691 235 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 GPR89AB7ZAQ6 455 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 PRAMEF26H0Y7S4 382 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 ZNF217O75362 1048 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 GPR89BP0CG08 455 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 ICAM2P13598 275 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 RAB3AP20336 220 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 SLC2A5P22732 501 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 RABIFP47224 123 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 CSNK1EP49674 416 aaKnown RBP12.17□□□□□ -0.46
SCAF4-201ENST00000286835 PPP1CAP62136 330 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 ZNF425Q6IV72 752 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 KCTD18Q6PI47 426 aaPredicted RBP12.17□□□□□ -0.46
SCAF4-201ENST00000286835 LINC00346Q8IVM7 164 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 TEX19Q8NA77 164 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 NPEPL1Q8NDH3 523 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 OR2A5Q96R48 311 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 FOXQ1Q9C009 403 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 EPHA6Q9UF33 1036 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 KLHDC2Q9Y2U9 406 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 COL4A4P53420 1690 aaPredicted RBP12.17□□□□□ -0.46
SCAF4-201ENST00000286835 GPR179Q6PRD1 2367 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 H7C417 338 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 XRCC3O43542 346 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 TNFRSF4P43489 277 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 CXCL12P48061 93 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 ELFN2Q5R3F8 820 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 RGS7BPQ6MZT1 257 aaPredicted RBP12.17□□□□□ -0.46
SCAF4-201ENST00000286835 KLHL24Q6TFL4 600 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 MED25Q71SY5 747 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 STOML3Q8TAV4 291 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 PHYHIPQ92561 330 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 PELOQ9BRX2 385 aaKnown RBP12.17□□□□□ -0.46
SCAF4-201ENST00000286835 PIPOXQ9P0Z9 390 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 MTFP1Q9UDX5 166 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 CHRNA9Q9UGM1 479 aa12.17□□□□□ -0.46
SCAF4-201ENST00000286835 TCF20Q9UGU0 1960 aaKnown RBP12.17□□□□□ -0.46
SCAF4-201ENST00000286835 ARHGEF17Q96PE2 2063 aaPredicted RBP12.17□□□□□ -0.46
SCAF4-201ENST00000286835 MFSD2BA6NFX1 497 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms