RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 FBXL4Q9UKA2 621 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 ZNF443Q9Y2A4 671 aaPredicted RBP9.54□□□□□ -0.88
ERCC3-201ENST00000285398 ZNF281Q9Y2X9 895 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 PTPRZ1P23471 2315 aaPredicted RBP9.54□□□□□ -0.88
ERCC3-201ENST00000285398 GLOD5A6NK44 160 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 OR2AT4A6NND4 320 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 PPM1DO15297 605 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 MAGEB4O15481 346 aaPredicted RBP9.54□□□□□ -0.88
ERCC3-201ENST00000285398 FGF16O43320 207 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 CFIP05156 583 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 MELTFP08582 738 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 OR4E1P0C645 316 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 PTAFRP25105 342 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 PEBP1P30086 187 aaKnown RBP9.54□□□□□ -0.88
ERCC3-201ENST00000285398 NXPH1P58417 271 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 TAF13Q15543 124 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 EIF2S3LQ2VIR3 472 aaKnown RBP9.54□□□□□ -0.88
ERCC3-201ENST00000285398 VWA2Q5GFL6 755 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 RBMS3Q6XE24 437 aaKnown RBP9.54□□□□□ -0.88
ERCC3-201ENST00000285398 ZNF793Q6ZN11 406 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 MISPQ8IVT2 679 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 CCDC116Q8IYX3 515 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 DND1Q8IYX4 353 aaKnown RBP9.54□□□□□ -0.88
ERCC3-201ENST00000285398 DTWD2Q8NBA8 298 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 ZSCAN1Q8NBB4 408 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 STEAP2Q8NFT2 490 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 OR5M8Q8NGP6 311 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 DNASE2BQ8WZ79 361 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 WNT2BQ93097 391 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 CNRIP1Q96F85 164 aaPredicted RBP9.54□□□□□ -0.88
ERCC3-201ENST00000285398 PRSS27Q9BQR3 290 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 POFUT1Q9H488 388 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 SEBOXQ9HB31 216 aaPredicted RBP9.54□□□□□ -0.88
ERCC3-201ENST00000285398 TREM1Q9NP99 234 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 SIGLEC7Q9Y286 467 aa9.54□□□□□ -0.88
ERCC3-201ENST00000285398 MDC1Q14676 2089 aaKnown RBP9.53□□□□□ -0.88
ERCC3-201ENST00000285398 GXYLT2A0PJZ3 443 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 FADS1O60427 444 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 ACTL6AO96019 429 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 IGHV2-70P01814 119 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 NME1P15531 152 aaKnown RBP9.53□□□□□ -0.88
ERCC3-201ENST00000285398 RAB28P51157 221 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 SCAND1P57086 179 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 CXADRP78310 365 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 SRSF4Q08170 494 aaKnown RBP9.53□□□□□ -0.88
ERCC3-201ENST00000285398 HABP2Q14520 560 aaPredicted RBP9.53□□□□□ -0.88
ERCC3-201ENST00000285398 ZNF750Q32MQ0 723 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 EIPR1Q53HC9 387 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 PMS2CLQ68D20 193 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 TMPRSS11FQ6ZWK6 438 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 INO80EQ8NBZ0 244 aaPredicted RBP9.53□□□□□ -0.88
ERCC3-201ENST00000285398 NUP43Q8NFH3 380 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 PFN4Q8NHR9 129 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 BPIFA2Q96DR5 249 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 AICDAQ9GZX7 198 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 MTHFD2LQ9H903 347 aaPredicted RBP9.53□□□□□ -0.88
ERCC3-201ENST00000285398 SYNPO2LQ9H987 977 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 C20orf141Q9NUB4 165 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 ZNF230Q9UIE0 474 aaPredicted RBP9.53□□□□□ -0.88
ERCC3-201ENST00000285398 IGKV1-8A0A0C4DH67 115 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 RNF222A6NCQ9 220 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 LRIT2A6NDA9 550 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 GGT3PA6NGU5 568 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 DUXAA6NLW8 204 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 OR1F1O43749 312 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 FCMRO60667 390 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 ITGB2P05107 769 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 PAX6P26367 422 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 MPIP34949 423 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 PDX1P52945 283 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 LTBQ06643 244 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 SLC9A5Q14940 896 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 ARHGAP19Q14CB8 494 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 TCEAL6Q6IPX3 200 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 ARHGAP11AQ6P4F7 1023 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 OR13C2Q8NGS9 318 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 OR2A1Q8NGT9 310 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 RNF141Q8WVD5 230 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 ZMYND19Q96E35 227 aaPredicted RBP9.53□□□□□ -0.88
ERCC3-201ENST00000285398 MOGAT1Q96PD6 335 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 CHST6Q9GZX3 395 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 UQCC1Q9NVA1 299 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 CNOT1A5YKK6 2376 aaKnown RBP9.53□□□□□ -0.88
ERCC3-201ENST00000285398 SPTBN2O15020 2390 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 LRP4O75096 1905 aa9.53□□□□□ -0.88
ERCC3-201ENST00000285398 OR2W5A6NFC9 320 aa9.52□□□□□ -0.88
ERCC3-201ENST00000285398 CLEC3AO75596 197 aa9.52□□□□□ -0.88
ERCC3-201ENST00000285398 RPN2P04844 631 aa9.52□□□□□ -0.88
ERCC3-201ENST00000285398 PVRP15151 417 aa9.52□□□□□ -0.88
ERCC3-201ENST00000285398 MC3RP41968 323 aa9.52□□□□□ -0.88
ERCC3-201ENST00000285398 ZNF136P52737 540 aa9.52□□□□□ -0.88
ERCC3-201ENST00000285398 PNLIPRP2P54317 469 aa9.52□□□□□ -0.88
ERCC3-201ENST00000285398 HHEXQ03014 270 aa9.52□□□□□ -0.88
ERCC3-201ENST00000285398 SSBP1Q04837 148 aaKnown RBP9.52□□□□□ -0.88
ERCC3-201ENST00000285398 BEX5Q5H9J7 111 aa9.52□□□□□ -0.88
ERCC3-201ENST00000285398 NKAPLQ5M9Q1 402 aa9.52□□□□□ -0.88
ERCC3-201ENST00000285398 STPG1Q5TH74 334 aa9.52□□□□□ -0.88
ERCC3-201ENST00000285398 STAC2Q6ZMT1 411 aa9.52□□□□□ -0.88
ERCC3-201ENST00000285398 WDR88Q6ZMY6 472 aa9.52□□□□□ -0.88
ERCC3-201ENST00000285398 FRRS1Q6ZNA5 592 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms