RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ADAM18Q9Y3Q7 739 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 OR14I1A6ND48 311 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 TMEM212A6NML5 194 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 BCL2L11O43521 198 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 CD14P08571 375 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 ADRA2CP18825 462 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 SDHAP31040 664 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 CSF2RBP32927 897 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 PSMB10P40306 273 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 LUMP51884 338 aaPredicted RBP9.4□□□□□ -0.9
SKA1-201ENST00000285116 YPEL5P62699 121 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 RPS15P62841 145 aaKnown RBP9.4□□□□□ -0.9
SKA1-201ENST00000285116 KLHL26Q53HC5 615 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 FAM209BQ5JX69 171 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 JMJD6Q6NYC1 403 aaPredicted RBP9.4□□□□□ -0.9
SKA1-201ENST00000285116 ANKRD16Q6P6B7 361 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 NPSR1Q6W5P4 371 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 DMBX1Q8NFW5 382 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 OR5AK2Q8NH90 309 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 C1orf198Q9H425 327 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 TCF7L1Q9HCS4 588 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 MRM2Q9UI43 246 aaKnown RBP9.4□□□□□ -0.9
SKA1-201ENST00000285116 EDARQ9UNE0 448 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 TMEM131Q92545 1883 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 POM121BA6NF01 834 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 ZNF860A6NHJ4 632 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 OR4C45A6NMZ5 311 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 RAD1O60671 282 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 CD8AP01732 235 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 NTSR1P30989 418 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 RPL4P36578 427 aaKnown RBP9.4□□□□□ -0.9
SKA1-201ENST00000285116 LSSP48449 732 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 NR0B1P51843 470 aaKnown RBP9.4□□□□□ -0.9
SKA1-201ENST00000285116 FAM53BQ14153 422 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 GUCA2BQ16661 112 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 ENPP7Q6UWV6 458 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 CBLN2Q8IUK8 224 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 OR5T3Q8NGG3 340 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 GPR148Q8TDV2 347 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 CCDC107Q8WV48 283 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 EDAQ92838 391 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 MCHR2Q969V1 340 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 SLC25A28Q96A46 364 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 ELSPBP1Q96BH3 223 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 STEAP1Q9UHE8 339 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 ZNF107Q9UII5 783 aaPredicted RBP9.4□□□□□ -0.9
SKA1-201ENST00000285116 PCDHB10Q9UN67 800 aa9.4□□□□□ -0.9
SKA1-201ENST00000285116 ABCA7Q8IZY2 2146 aa9.4□□□□□ -0.91
SKA1-201ENST00000285116 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.39□□□□□ -0.91
SKA1-201ENST00000285116 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.39□□□□□ -0.91
SKA1-201ENST00000285116 LINC00587B1AMM8 73 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 SNAPINO95295 136 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 PMS2P2O95744 297 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 ASAH2BP0C7U1 165 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 SPP1P10451 314 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 ITPKBP27987 946 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 ACTR1BP42025 376 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 ACTR1AP61163 376 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 RASGEF1BQ0VAM2 473 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 FUT7Q11130 342 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 HYAL1Q12794 435 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 SNTB1Q13884 538 aaKnown RBP9.39□□□□□ -0.91
SKA1-201ENST00000285116 CCINQ13939 588 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 ZNF74Q16587 644 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 AVPI1Q5T686 147 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 STPG1Q5TH74 334 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 GLT8D1Q68CQ7 371 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 WBP2NLQ6ICG8 309 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 ATG4DQ86TL0 474 aaPredicted RBP9.39□□□□□ -0.91
SKA1-201ENST00000285116 ZNF227Q86WZ6 799 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 YAF2Q8IY57 180 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 BEST3Q8N1M1 668 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 EXO5Q9H790 373 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 Q9N2J8 555 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 ZFP57Q9NU63 452 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 FRRS1LQ9P0K9 344 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 MYEF2Q9P2K5 600 aaKnown RBP9.39□□□□□ -0.91
SKA1-201ENST00000285116 TBC1D3DA0A087WVF3 549 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 TBC1D3LB9A6J9 549 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 SULT1C2O00338 296 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 OR10H2O60403 315 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 TBC1D3HP0C7X1 549 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 AKAIN1P0CW23 69 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 SLC25A4P12235 298 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 BDKRB2P30411 391 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 CDKN2AP42771 156 aaKnown RBP9.39□□□□□ -0.91
SKA1-201ENST00000285116 GPR3P46089 330 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 SRSF4Q08170 494 aaKnown RBP9.39□□□□□ -0.91
SKA1-201ENST00000285116 DMWDQ09019 674 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 C10orf91Q5T1B1 145 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 TBC1D3CQ6IPX1 549 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 TDHQ8IZJ6 230 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 TBC1D3Q8IZP1 549 aaPredicted RBP9.39□□□□□ -0.91
SKA1-201ENST00000285116 RCBTB1Q8NDN9 531 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 OR1S2Q8NGQ3 325 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 THAP6Q8TBB0 222 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 ZPLD1Q8TCW7 415 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 STK35Q8TDR2 534 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 DUSP19Q8WTR2 217 aa9.39□□□□□ -0.91
SKA1-201ENST00000285116 BMFQ96LC9 184 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms