RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ICOSLGO75144 302 aa16.56■□□□□ 0.24
PDLIM3-201ENST00000284767 GUSBP08236 651 aa16.56■□□□□ 0.24
PDLIM3-201ENST00000284767 ART1P52961 327 aa16.56■□□□□ 0.24
PDLIM3-201ENST00000284767 DLX5P56178 289 aa16.56■□□□□ 0.24
PDLIM3-201ENST00000284767 FAM69BQ5VUD6 431 aa16.56■□□□□ 0.24
PDLIM3-201ENST00000284767 ULK3Q6PHR2 472 aa16.56■□□□□ 0.24
PDLIM3-201ENST00000284767 STT3BQ8TCJ2 826 aa16.56■□□□□ 0.24
PDLIM3-201ENST00000284767 PNPLA2Q96AD5 504 aa16.56■□□□□ 0.24
PDLIM3-201ENST00000284767 MIB2Q96AX9 1013 aa16.56■□□□□ 0.24
PDLIM3-201ENST00000284767 CCDC74BQ96LY2 380 aa16.56■□□□□ 0.24
PDLIM3-201ENST00000284767 C1QTNF6Q9BXI9 259 aa16.56■□□□□ 0.24
PDLIM3-201ENST00000284767 CCDC86Q9H6F5 360 aaKnown RBP16.56■□□□□ 0.24
PDLIM3-201ENST00000284767 IL33O95760 270 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 PPP3CBP16298 524 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 DCTDP32321 178 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 SIGLEC14Q08ET2 396 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 DNM1P46Q6ZS02 220 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 DNAAF1Q8NEP3 725 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 ATOH1Q92858 354 aaPredicted RBP16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 DNAJA3Q96EY1 480 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 UBQLN4Q9NRR5 601 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 IER3IP1Q9Y5U9 82 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 NUP210LQ5VU65 1888 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 UBE2QL1A1L167 161 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 CDK2P24941 298 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 FNDC7Q5VTL7 733 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 RHBDD2Q6NTF9 364 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 LINC00114Q6XXX2 140 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 TMUB2Q71RG4 321 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 C3orf49Q96BT1 292 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 ORAI1Q96D31 301 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 AKIRIN1Q9H9L7 192 aaPredicted RBP16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 ZC4H2Q9NQZ6 224 aa16.55■□□□□ 0.24
PDLIM3-201ENST00000284767 SELENOFO60613 162 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 MST1P26927 711 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 FAUP35544 74 aaKnown RBP16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 PSMD4P55036 377 aaKnown RBP16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 TAS2R20P59543 309 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 TFAP2EQ6VUC0 442 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 RELTQ969Z4 430 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 SLITRK2Q9H156 845 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 MKKSQ9NPJ1 570 aaPredicted RBP16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 MED11Q9P086 117 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 GPR179Q6PRD1 2367 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 FRG2CA6NGY1 282 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 SCRG1O75711 98 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 WISP1O95388 367 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 FGF2P09038 288 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 POU3F2P20265 443 aaPredicted RBP16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 CLDN12P56749 244 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 CBFBQ13951 182 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 SFRP5Q5T4F7 317 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 LCN10Q6JVE6 187 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 FAAP20Q6NZ36 180 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 COQ8AQ8NI60 647 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 THAP3Q8WTV1 239 aaPredicted RBP16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 RGP1Q92546 391 aaPredicted RBP16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 B3GNT4Q9C0J1 378 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 OCIAD1Q9NX40 245 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 OPN4Q9UHM6 478 aa16.54■□□□□ 0.24
PDLIM3-201ENST00000284767 FREM2Q5SZK8 3169 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 MCIDASD6RGH6 385 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 ATP6V1G2-DDX39BF2Z307 99 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 SCDO00767 359 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 ZFPL1O95159 310 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 GABRA1P14867 456 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 PNLIPP16233 465 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 IL32P24001 234 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 SKP2Q13309 424 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 BIKQ13323 160 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 TRIM61Q5EBN2 209 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 PHF19Q5T6S3 580 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 SLC6A19Q695T7 634 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 NHLRC1Q6VVB1 395 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 DPY19L2P2Q6ZN68 376 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 HSD17B13Q7Z5P4 300 aaPredicted RBP16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 DAZLQ92904 295 aaKnown RBP16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 SGTBQ96EQ0 304 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 WWTR1Q9GZV5 400 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 LDAHQ9H6V9 325 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 PCNX3Q9H6A9 2034 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 SLC22A23A1A5C7 686 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 EFCAB7A8K855 629 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 TOR1AO14656 332 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 ARPC5O15511 151 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 LPLP06858 475 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 SPI1P17947 270 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 MAPK3P27361 379 aaPredicted RBP16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 NANOS3P60323 173 aaKnown RBP16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 GK2Q14410 553 aaPredicted RBP16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 ZNF273Q14593 569 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 RBMS2Q15434 407 aaKnown RBP16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 ALKAL2Q6UX46 152 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 STAC2Q6ZMT1 411 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 MARCH3Q86UD3 253 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 TMEM105Q8N8V8 129 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 NPEPL1Q8NDH3 523 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 OR1N1Q8NGS0 311 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 IFI44Q8TCB0 444 aa16.53■□□□□ 0.24
PDLIM3-201ENST00000284767 NMNAT2Q9BZQ4 307 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms