RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 DNAAF1Q8NEP3 725 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 PHOSPHO1Q8TCT1 267 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 THEM6Q8WUY1 208 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 HIST1H2ACQ93077 130 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 MCHR2Q969V1 340 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 MOGAT1Q96PD6 335 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 SMAD5Q99717 465 aaKnown RBP11.67□□□□□ -0.54
C9orf3-201ENST00000277198 LAT2Q9GZY6 243 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 MTFP1Q9UDX5 166 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 FLVCR2Q9UPI3 526 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 MSRB2Q9Y3D2 182 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 MMACHCQ9Y4U1 282 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 DSPP15924 2871 aaKnown RBP11.67□□□□□ -0.54
C9orf3-201ENST00000277198 PLSCR5A0PG75 271 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 FITM1A5D6W6 292 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 PSMD9O00233 223 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 RBBP9O75884 186 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 RPP14O95059 124 aaKnown RBP11.67□□□□□ -0.54
C9orf3-201ENST00000277198 MPC2O95563 127 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 CSF1P09603 554 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 MAOAP21397 527 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 CAPZBP47756 277 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 GABRA4P48169 554 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 MAT1AQ00266 395 aaKnown RBP11.67□□□□□ -0.54
C9orf3-201ENST00000277198 LTBQ06643 244 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 CBFBQ13951 182 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 RBMS2Q15434 407 aaKnown RBP11.67□□□□□ -0.54
C9orf3-201ENST00000277198 CD226Q15762 336 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 HES3Q5TGS1 186 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 SLC25A25Q6KCM7 469 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 ANKRD16Q6P6B7 361 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 TMPRSS7Q7RTY8 843 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 ZNF761Q86XN6 746 aaPredicted RBP11.67□□□□□ -0.54
C9orf3-201ENST00000277198 SERPINA12Q8IW75 414 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 ASB17Q8WXJ9 295 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 ORAI1Q96D31 301 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 DCBLD2Q96PD2 775 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 RBP7Q96R05 134 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 INTS14Q96SY0 518 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.67□□□□□ -0.54
C9orf3-201ENST00000277198 MRPL15Q9P015 296 aaKnown RBP11.67□□□□□ -0.54
C9orf3-201ENST00000277198 KIF25Q9UIL4 384 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 KLHDC2Q9Y2U9 406 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 APC2O95996 2303 aa11.67□□□□□ -0.54
C9orf3-201ENST00000277198 CACNA1BQ00975 2339 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 FRG2CA6NGY1 282 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 FAM171A2A8MVW0 826 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 LMO7DNF2Z398 122 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 RGS11O94810 467 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 RRASP10301 218 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 ACP1P24666 158 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 GRPRP30550 384 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 RORAP35398 523 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 CLDN12P56749 244 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 SLC37A1P57057 533 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 DCAF7P61962 342 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 TSPAN5P62079 268 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 ERV3-1Q14264 604 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 GRM7Q14831 915 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 LINC00303Q3SY05 128 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 MESTQ5EB52 335 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 TMPRSS12Q86WS5 348 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 ZNF676Q8N7Q3 588 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 MMABQ96EY8 250 aaPredicted RBP11.66□□□□□ -0.54
C9orf3-201ENST00000277198 TSSK2Q96PF2 358 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 TSPAN32Q96QS1 320 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 SRA1Q9HD15 236 aaKnown RBP11.66□□□□□ -0.54
C9orf3-201ENST00000277198 PIPOXQ9P0Z9 390 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 MGAT4CQ9UBM8 478 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 EPHA6Q9UF33 1036 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 KMT2BQ9UMN6 2715 aaPredicted RBP11.66□□□□□ -0.54
C9orf3-201ENST00000277198 RP1P56715 2156 aa11.66□□□□□ -0.54
C9orf3-201ENST00000277198 UBE2QL1A1L167 161 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 OR2M5A3KFT3 312 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 CPED1A4D0V7 1026 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 LILRA5A6NI73 299 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 OR6C65A6NJZ3 312 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 C17orf105B2RV13 164 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 UTS2O95399 124 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 MT-ATP6P00846 226 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 RAD52P43351 418 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 DLX5P56178 289 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 PSMA6P60900 246 aaKnown RBP11.65□□□□□ -0.54
C9orf3-201ENST00000277198 INSM1Q01101 510 aaPredicted RBP11.65□□□□□ -0.54
C9orf3-201ENST00000277198 CBLN3Q6UW01 205 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 OTOSQ8NHW6 89 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 TMEM106AQ96A25 262 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 MAP3K3Q99759 626 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 BEX1Q9HBH7 125 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 IKZF2Q9UKS7 526 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 PCDHGA1Q9Y5H4 931 aa11.65□□□□□ -0.54
C9orf3-201ENST00000277198 ARHGEF17Q96PE2 2063 aaPredicted RBP11.65□□□□□ -0.54
C9orf3-201ENST00000277198 A0A1W2PQD3 144 aa11.65□□□□□ -0.55
C9orf3-201ENST00000277198 HMSDA8MTL9 139 aa11.65□□□□□ -0.55
C9orf3-201ENST00000277198 DCTN6O00399 190 aa11.65□□□□□ -0.55
C9orf3-201ENST00000277198 CDC40O60508 579 aaKnown RBP eCLIP11.65□□□□□ -0.55
C9orf3-201ENST00000277198 EIF4E2O60573 245 aaKnown RBP11.65□□□□□ -0.55
C9orf3-201ENST00000277198 F13BP05160 661 aa11.65□□□□□ -0.55
C9orf3-201ENST00000277198 NFYAP23511 347 aaPredicted RBP11.65□□□□□ -0.55
C9orf3-201ENST00000277198 MST1P26927 711 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms