RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 UPRTQ96BW1 309 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 KCTD12Q96CX2 325 aaKnown RBP13.25□□□□□ -0.29
CNOT9-201ENST00000273064 HSPB6O14558 160 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 HLA-AP01891 365 aaKnown RBP13.25□□□□□ -0.29
CNOT9-201ENST00000273064 HOXB5P09067 269 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 HTR2CP28335 458 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 OR14A16Q8NHC5 309 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 SNX18Q96RF0 628 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 APMAPQ9HDC9 416 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 V9GYH0 126 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 METTL12A8MUP2 240 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 LMO7DNF2Z398 122 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 TNFSF12O43508 249 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 SLC43A1O75387 559 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 SCO1O75880 301 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 IL13RA1P78552 427 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 MANEAQ5SRI9 462 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 C17orf107Q6ZR85 190 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 SLC16A9Q7RTY1 509 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 GPR155Q7Z3F1 870 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 OR2G2Q8NGZ5 317 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 PIGTQ969N2 578 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 MNTQ99583 582 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 CAMK2AQ9UQM7 478 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 COL6A6A6NMZ7 2263 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 PKDREJQ9NTG1 2253 aa13.25□□□□□ -0.29
CNOT9-201ENST00000273064 PLA2G10O15496 165 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 SRFP11831 508 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 ZNF35P13682 527 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 BCKDHBP21953 392 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 ABCD3P28288 659 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 GPLD1P80108 840 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 ZNF117Q03924 483 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 UBE2NLQ5JXB2 153 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 TMEM201Q5SNT2 666 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 TMEM91Q6ZNR0 172 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 PRR18Q8N4B5 295 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 C10orf90Q96M02 699 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 SIGLEC11Q96RL6 698 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 VN1R1Q9GZP7 353 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 C20orf85Q9H1P6 137 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 B3GALT1Q9Y5Z6 326 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 NSG1A0A0A6YYJ2 146 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 IGHV4-34P06331 123 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 ACTBP60709 375 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 RPL27P61353 136 aaKnown RBP13.24□□□□□ -0.29
CNOT9-201ENST00000273064 ACTG1P63261 375 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 C17orf67Q0P5P2 114 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 BAIAP2L2Q6UXY1 529 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 STAC2Q6ZMT1 411 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 LINC00696Q6ZRV3 163 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 KIAA1958Q8N8K9 716 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 MIB2Q96AX9 1013 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 H0YIG0 161 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 HSPA12AO43301 675 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 ZIC2O95409 532 aaPredicted RBP13.24□□□□□ -0.29
CNOT9-201ENST00000273064 EPPINO95925 133 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 CSNK1A1P48729 337 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 CDC20Q12834 499 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 TNK1Q13470 666 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 GUSBP11Q6P575 273 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 YRDCQ86U90 279 aaKnown RBP13.24□□□□□ -0.29
CNOT9-201ENST00000273064 GPR137CQ8N3F9 429 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 NUDCD2Q8WVJ2 157 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 SMIM3Q9BZL3 60 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 ZNF442Q9H7R0 627 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 MMP25Q9NPA2 562 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 B9D1Q9UPM9 204 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 ZFHX2Q9C0A1 2572 aaPredicted RBP13.24□□□□□ -0.29
CNOT9-201ENST00000273064 TMEM229AB2RXF0 380 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 TNFRSF10AO00220 468 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 DBHP09172 617 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 AKAIN1P0CW23 69 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 DPP4P27487 766 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 RFX2P48378 723 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 DAP3P51398 398 aaKnown RBP13.24□□□□□ -0.29
CNOT9-201ENST00000273064 Q6ZTK2 550 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 OR6V1Q8N148 313 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 URM1Q9BTM9 101 aaKnown RBP13.24□□□□□ -0.29
CNOT9-201ENST00000273064 CHRNA9Q9UGM1 479 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 SLC5A6Q9Y289 635 aa13.24□□□□□ -0.29
CNOT9-201ENST00000273064 TEX51A0A1B0GUA7 166 aa13.23□□□□□ -0.29
CNOT9-201ENST00000273064 TRIM64A6NGJ6 449 aa13.23□□□□□ -0.29
CNOT9-201ENST00000273064 TMEM212A6NML5 194 aa13.23□□□□□ -0.29
CNOT9-201ENST00000273064 ENDOUP21128 410 aaKnown RBP13.23□□□□□ -0.29
CNOT9-201ENST00000273064 B3GNTL1Q67FW5 361 aaPredicted RBP13.23□□□□□ -0.29
CNOT9-201ENST00000273064 TMEM81Q6P7N7 255 aa13.23□□□□□ -0.29
CNOT9-201ENST00000273064 NPSR1Q6W5P4 371 aa13.23□□□□□ -0.29
CNOT9-201ENST00000273064 OR51E1Q8TCB6 317 aa13.23□□□□□ -0.29
CNOT9-201ENST00000273064 ELP5Q8TE02 316 aa13.23□□□□□ -0.29
CNOT9-201ENST00000273064 ZNF845Q96IR2 970 aaPredicted RBP13.23□□□□□ -0.29
CNOT9-201ENST00000273064 ARL5BQ96KC2 179 aa13.23□□□□□ -0.29
CNOT9-201ENST00000273064 SLC39A1Q9NY26 324 aa13.23□□□□□ -0.29
CNOT9-201ENST00000273064 FREM3P0C091 2139 aa13.23□□□□□ -0.29
CNOT9-201ENST00000273064 SC5DO75845 299 aa13.23□□□□□ -0.29
CNOT9-201ENST00000273064 EFEMP2O95967 443 aa13.23□□□□□ -0.29
CNOT9-201ENST00000273064 WNT1P04628 370 aa13.23□□□□□ -0.29
CNOT9-201ENST00000273064 CT45A8P0DMV1 189 aa13.23□□□□□ -0.29
CNOT9-201ENST00000273064 CT45A9P0DMV2 189 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms