RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 DCBLD2Q96PD2 775 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 GFI1Q99684 422 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 NEURL2Q9BR09 285 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 ABHD6Q9BV23 337 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 GPR87Q9BY21 358 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 ANKRD10Q9NXR5 420 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 MALT1Q9UDY8 824 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 LOC102725191A0A1B0GVB3 256 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 ANKRD61A6NGH8 418 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 AQP7P3A6NL99 342 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 TMEM212A6NML5 194 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 C21orf140B9A014 251 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 RAMP1O60894 148 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 KHDRBS3O75525 346 aaKnown RBP14.85□□□□□ -0.03
CCDC40-201ENST00000269318 PAHP00439 452 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 EIF4EP06730 217 aaKnown RBP14.85□□□□□ -0.03
CCDC40-201ENST00000269318 KLK2P20151 261 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 KIR3DL2P43630 455 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 SLC35A1P78382 337 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 SCN1BQ07699 218 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 EIF2B1Q14232 305 aaKnown RBP14.85□□□□□ -0.03
CCDC40-201ENST00000269318 ACER2Q5QJU3 275 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 CCBE1Q6UXH8 406 aaPredicted RBP14.85□□□□□ -0.03
CCDC40-201ENST00000269318 ZNF227Q86WZ6 799 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 TRMT10AQ8TBZ6 339 aaKnown RBP14.85□□□□□ -0.03
CCDC40-201ENST00000269318 RNF128Q8TEB7 428 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 SMAD5Q99717 465 aaKnown RBP14.85□□□□□ -0.03
CCDC40-201ENST00000269318 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.85□□□□□ -0.03
CCDC40-201ENST00000269318 SACM1LQ9NTJ5 587 aa14.85□□□□□ -0.03
CCDC40-201ENST00000269318 AK6Q9Y3D8 172 aaKnown RBP14.85□□□□□ -0.03
CCDC40-201ENST00000269318 A0A0G2JMM0 328 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 A0A1W2PPB8 328 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 A0A1W2PRS3 328 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 OR2M5A3KFT3 312 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 KIR3DP1A8MWS1 328 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 FAM25AB3EWG3 89 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 FAM25CB3EWG5 89 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 FAM25GB3EWG6 89 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 SULT2B1O00204 365 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 ZNF254O75437 659 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 CBR3O75828 277 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 PMS2P2O95744 297 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 HLA-DQB1P01920 261 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 APOA1P02647 267 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 HRGP04196 525 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 ZNF17P17021 662 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 NPR2P20594 1047 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 DLSTP36957 453 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 RFX2P48378 723 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 CCR9P51686 369 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 H3F3AP84243 136 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 RASGEF1BQ0VAM2 473 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 ASAH1Q13510 395 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 IL18Q14116 193 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 WDR38Q5JTN6 314 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 KCTD18Q6PI47 426 aaPredicted RBP14.84□□□□□ -0.03
CCDC40-201ENST00000269318 SAMD12Q8N8I0 201 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 OR52N5Q8NH56 324 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 JSRP1Q96MG2 331 aaPredicted RBP14.84□□□□□ -0.03
CCDC40-201ENST00000269318 OXGR1Q96P68 337 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 ABRACLQ9P1F3 81 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 KLHL9Q9P2J3 617 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 EXTL2Q9UBQ6 330 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 DKKL1Q9UK85 242 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 PGA4P0DJD7 388 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 PGA3P0DJD8 388 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 RAET1LQ5VY80 246 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 ST7LQ8TDW4 575 aa14.84□□□□□ -0.03
CCDC40-201ENST00000269318 SLC25A44Q96H78 314 aaPredicted RBP14.84□□□□□ -0.03
CCDC40-201ENST00000269318 TRBV5-7A0A0A0MS05 114 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 TRABD2BA6NFA1 517 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 AQP8O94778 261 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 ZNF432O94892 652 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 PNPP00491 289 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 ZNF823P16415 610 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 MAPK3P27361 379 aaPredicted RBP14.83□□□□□ -0.04
CCDC40-201ENST00000269318 DNASE1L1P49184 302 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 TAB1Q15750 504 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 THEM4Q5T1C6 240 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 TMEM225Q6GV28 225 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 NRARPQ7Z6K4 114 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 KRT77Q7Z794 578 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 GPAT4Q86UL3 456 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 RDH10Q8IZV5 341 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 Q8N402 240 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 NOXO1Q8NFA2 376 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 OR4M1Q8NGD0 313 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 OR5H6Q8NGV6 325 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 OR10AC1Q8NH08 325 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 OR6X1Q8NH79 312 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 RBP7Q96R05 134 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 KCNJ15Q99712 375 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 COMMD4Q9H0A8 199 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 SLC25A18Q9H1K4 315 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 LRP12Q9Y561 859 aa14.83□□□□□ -0.04
CCDC40-201ENST00000269318 FREM3P0C091 2139 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 SRSF10O75494 262 aaKnown RBP14.82□□□□□ -0.04
CCDC40-201ENST00000269318 IGHG1P01857 330 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 P04436 131 aa14.82□□□□□ -0.04
CCDC40-201ENST00000269318 HNRNPCP07910 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 296.9 ms