RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 MAP2K6P52564 334 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 MEF2DQ14814 521 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 ZNF628Q5EBL2 1059 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 C16orf47Q6ZP98 133 aaPredicted RBP12.48□□□□□ -0.41
NPC1-201ENST00000269228 EXD3Q8N9H8 876 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 OR10G3Q8NGC4 313 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 KCNG3Q8TAE7 436 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 ZNF385DQ9H6B1 395 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 FKBP14Q9NWM8 211 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 EHFQ9NZC4 300 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 A0A087WZY1 265 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 MCRIP1C9JLW8 97 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 MPPED1O15442 326 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 CLEC2LP0C7M8 214 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 TBXA2RP21731 343 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 BLVRBP30043 206 aaPredicted RBP12.48□□□□□ -0.41
NPC1-201ENST00000269228 IDH3GP51553 393 aaPredicted RBP12.48□□□□□ -0.41
NPC1-201ENST00000269228 DEFA5Q01523 94 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 NKG7Q16617 165 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 PRICKLE4Q2TBC4 344 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 CTU2Q2VPK5 515 aaKnown RBP12.48□□□□□ -0.41
NPC1-201ENST00000269228 CALHM3Q86XJ0 350 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 MSRB3Q8IXL7 192 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 SLC7A5P1Q8MH63 180 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 SLC22A24Q8N4F4 322 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 DUS3LQ96G46 650 aaKnown RBP12.48□□□□□ -0.41
NPC1-201ENST00000269228 RCE1Q9Y256 329 aa12.48□□□□□ -0.41
NPC1-201ENST00000269228 AHCTF1Q8WYP5 2266 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 TRGV8A0A0C4DH27 118 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 GIFP27352 417 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 MTNR1BP49286 362 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 FGL1Q08830 312 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 THEM4Q5T1C6 240 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.47□□□□□ -0.41
NPC1-201ENST00000269228 BBS1Q8NFJ9 593 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 ZBTB8AQ96BR9 441 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 KCTD12Q96CX2 325 aaKnown RBP12.47□□□□□ -0.41
NPC1-201ENST00000269228 SLAMF6Q96DU3 332 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 RAB3CQ96E17 227 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 NICN1Q9BSH3 213 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 GABARAPL3Q9BY60 117 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 TXNIPQ9H3M7 391 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 GPATCH2Q9NW75 528 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 ANKUB1A6NFN9 424 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 GUSBP08236 651 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 FCARP24071 287 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 DIO1P49895 249 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 PCBP4P57723 403 aaKnown RBP12.47□□□□□ -0.41
NPC1-201ENST00000269228 ERVK-16P61578 105 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 ZIC1Q15915 447 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 WIPI1Q5MNZ9 446 aaPredicted RBP12.47□□□□□ -0.41
NPC1-201ENST00000269228 GLYATL3Q5SZD4 288 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 RHBDD2Q6NTF9 364 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 SFTPA2Q8IWL1 248 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 PRRX2Q99811 253 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 PROCRQ9UNN8 238 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 MAB21L2Q9Y586 359 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 NXPH2O95156 264 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 CDK2P24941 298 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 SUMO3P55854 103 aaPredicted RBP12.47□□□□□ -0.41
NPC1-201ENST00000269228 RTL6Q6ICC9 239 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 NANOGP1Q8N7R0 232 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 OR11G2Q8NGC1 345 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 OR51D1Q8NGF3 324 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 PRDM6Q9NQX0 595 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 MLXQ9UH92 298 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 TRAPPC2LQ9UL33 140 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 PRSS37A4D1T9 235 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 MAGEB4O15481 346 aaPredicted RBP12.47□□□□□ -0.41
NPC1-201ENST00000269228 GLSO94925 669 aaPredicted RBP12.47□□□□□ -0.41
NPC1-201ENST00000269228 TAS2R19P59542 299 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 GALEQ14376 348 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 FAM76BQ5HYJ3 339 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 SYT6Q5T7P8 510 aaPredicted RBP12.47□□□□□ -0.41
NPC1-201ENST00000269228 PAQR6Q6TCH4 344 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 METAP1DQ6UB28 335 aaPredicted RBP12.47□□□□□ -0.41
NPC1-201ENST00000269228 SULF2Q8IWU5 870 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 LAX1Q8IWV1 398 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 GNRHR2Q96P88 292 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 NELFAQ9H3P2 528 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 LSM5Q9Y4Y9 91 aaKnown RBP12.47□□□□□ -0.41
NPC1-201ENST00000269228 TIMM10BQ9Y5J6 103 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 NUBP2Q9Y5Y2 271 aa12.47□□□□□ -0.41
NPC1-201ENST00000269228 BET1O15155 118 aa12.46□□□□□ -0.41
NPC1-201ENST00000269228 TOX3O15405 576 aaPredicted RBP12.46□□□□□ -0.41
NPC1-201ENST00000269228 IL7P13232 177 aa12.46□□□□□ -0.41
NPC1-201ENST00000269228 TAS2R31P59538 309 aa12.46□□□□□ -0.41
NPC1-201ENST00000269228 METTL11BQ5VVY1 283 aa12.46□□□□□ -0.41
NPC1-201ENST00000269228 OR5AS1Q8N127 324 aa12.46□□□□□ -0.41
NPC1-201ENST00000269228 SMAP2Q8WU79 429 aaPredicted RBP12.46□□□□□ -0.41
NPC1-201ENST00000269228 ZNF286AQ9HBT8 521 aa12.46□□□□□ -0.41
NPC1-201ENST00000269228 HDGFL3Q9Y3E1 203 aa12.46□□□□□ -0.41
NPC1-201ENST00000269228 GRPP07492 148 aa12.46□□□□□ -0.41
NPC1-201ENST00000269228 HOXD12P35452 270 aa12.46□□□□□ -0.41
NPC1-201ENST00000269228 DSCR4P56555 118 aaPredicted RBP12.46□□□□□ -0.41
NPC1-201ENST00000269228 ACER2Q5QJU3 275 aa12.46□□□□□ -0.41
NPC1-201ENST00000269228 VASH2Q86V25 355 aa12.46□□□□□ -0.41
NPC1-201ENST00000269228 LACC1Q8IV20 430 aa12.46□□□□□ -0.41
NPC1-201ENST00000269228 BPIFB2Q8N4F0 458 aa12.46□□□□□ -0.41
NPC1-201ENST00000269228 OR2T35Q8NGX2 323 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms