RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 GLTPQ9NZD2 209 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 KLHDC2Q9Y2U9 406 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 DMXL2Q8TDJ6 3036 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 LOC100506127A0A0U1RQW1 187 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 E9PI62 339 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 K7ENP7 123 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 TFECO14948 347 aaPredicted RBP12.53□□□□□ -0.4
SS18-201ENST00000269137 GBX2P52951 348 aaPredicted RBP12.53□□□□□ -0.4
SS18-201ENST00000269137 PMP22Q01453 160 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 SRYQ05066 204 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 ZNF169Q14929 603 aaPredicted RBP12.53□□□□□ -0.4
SS18-201ENST00000269137 CCDC58Q4VC31 144 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 TP53I3Q53FA7 332 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 CARD17Q5XLA6 110 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 INO80CQ6PI98 192 aaPredicted RBP12.53□□□□□ -0.4
SS18-201ENST00000269137 LRFN4Q6PJG9 635 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 CD200R1LQ6Q8B3 271 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 Q6ZS92 163 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 ZFP41Q8N8Y5 198 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 HAVCR2Q8TDQ0 301 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 ASB17Q8WXJ9 295 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 PNPLA2Q96AD5 504 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 COQ7Q99807 217 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 CENPOQ9BU64 300 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 SSR3Q9UNL2 185 aa12.53□□□□□ -0.4
SS18-201ENST00000269137 SIRT4Q9Y6E7 314 aaPredicted RBP12.53□□□□□ -0.4
SS18-201ENST00000269137 LAMA5O15230 3695 aa12.52□□□□□ -0.4
SS18-201ENST00000269137 PRRC2CQ9Y520 2896 aaKnown RBP12.52□□□□□ -0.4
SS18-201ENST00000269137 MGAQ8IWI9 3026 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 PTPRQQ9UMZ3 2332 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 IGKV3D-15A0A087WSY6 115 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 PRR32B1ATL7 298 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 OGG1O15527 345 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 PLPP2O43688 288 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 QDPRP09417 244 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 TACSTD2P09758 323 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 ZNF182P17025 639 aaPredicted RBP12.52□□□□□ -0.41
SS18-201ENST00000269137 GALP22466 123 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 LAP3P28838 519 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 CSNK1A1P48729 337 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 RPS25P62851 125 aaKnown RBP12.52□□□□□ -0.41
SS18-201ENST00000269137 TUBA1BP68363 451 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 ADAM8P78325 824 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 RASGEF1BQ0VAM2 473 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 MRPL28Q13084 256 aaKnown RBP12.52□□□□□ -0.41
SS18-201ENST00000269137 SOWAHCQ53LP3 525 aaPredicted RBP12.52□□□□□ -0.41
SS18-201ENST00000269137 C10orf128Q5T292 105 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 DMKNQ6E0U4 476 aaPredicted RBP12.52□□□□□ -0.41
SS18-201ENST00000269137 SLC18B1Q6NT16 456 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 TUBA1AQ71U36 451 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 C20orf196Q8IYI0 205 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 NDNFQ8TB73 568 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 NSMAFQ92636 917 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 FOXN4Q96NZ1 517 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 EXO5Q9H790 373 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 SPRR3Q9UBC9 169 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 KCNG2Q9UJ96 466 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 FOXD3Q9UJU5 478 aaPredicted RBP12.52□□□□□ -0.41
SS18-201ENST00000269137 GNG8Q9UK08 70 aa12.52□□□□□ -0.41
SS18-201ENST00000269137 ING1Q9UK53 422 aaPredicted RBP12.52□□□□□ -0.41
SS18-201ENST00000269137 PNMA8CA0A1B0GUJ8 204 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 A0A1B0GVC2 190 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 TRDV1A0A1B0GX56 115 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 METTL15A6NJ78 407 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 HSPB2A8KAH6 182 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 MKRN2OSH3BPM6 223 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 MAGEB4O15481 346 aaPredicted RBP12.51□□□□□ -0.41
SS18-201ENST00000269137 AQP8O94778 261 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 MPZL1O95297 269 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 SYNGR4O95473 234 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 ABHD16AO95870 558 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 HLA-DPB1P04440 258 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 CD1AP06126 327 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 PSKH1P11801 424 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 ZNF823P16415 610 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 FGF9P31371 208 aaPredicted RBP12.51□□□□□ -0.41
SS18-201ENST00000269137 TGM4P49221 684 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 SIRPAP78324 504 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 HSPB2Q16082 182 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 KCNMB1Q16558 191 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 RPL22L1Q6P5R6 122 aaKnown RBP12.51□□□□□ -0.41
SS18-201ENST00000269137 USP43Q70EL4 1123 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 KBTBD8Q8NFY9 601 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 OR6N1Q8NGY5 312 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 DYNC2LI1Q8TCX1 351 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 RNF128Q8TEB7 428 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 TMEM45BQ96B21 275 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 WDYHV1Q96HA8 205 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 TTYH2Q9BSA4 534 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 TTTY10Q9BZA0 68 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 DCSTAMPQ9H295 470 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 ACOXLQ9NUZ1 547 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 MRM2Q9UI43 246 aaKnown RBP12.51□□□□□ -0.41
SS18-201ENST00000269137 ST6GALNAC2Q9UJ37 374 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 MCTS1Q9ULC4 181 aaKnown RBP12.51□□□□□ -0.41
SS18-201ENST00000269137 IGF2RP11717 2491 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 GPR171O14626 319 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 KRT8P05787 483 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 SPARCP09486 303 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 RPS27P42677 84 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms