RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 NPIPB9F8W1W9 429 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 PRAF2O60831 178 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 ALOX5APP20292 161 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 PRPS1P60891 318 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 FMODQ06828 376 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 NR0B2Q15466 257 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 TTLL10Q6ZVT0 673 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 INTS14Q96SY0 518 aa15.18■□□□□ 0.02
SQLE-201ENST00000265896 MRTO4Q9UKD2 239 aaKnown RBP15.18■□□□□ 0.02
SQLE-201ENST00000265896 H7C417 338 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 SCDO00767 359 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 ARPC3O15145 178 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 PRAMEF2O60811 474 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 ICAM2P13598 275 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 PRSS3P35030 304 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 MNDAP41218 407 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 DLX5P56178 289 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 TAGLNQ01995 201 aaKnown RBP15.17■□□□□ 0.02
SQLE-201ENST00000265896 ZNF660Q6AZW8 331 aaPredicted RBP15.17■□□□□ 0.02
SQLE-201ENST00000265896 STEAP1BQ6NZ63 245 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 BAIAP2L2Q6UXY1 529 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 SLC36A1Q7Z2H8 476 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 GRAMD2AQ8IUY3 354 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 ABCA7Q8IZY2 2146 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 LMF2Q9BU23 707 aaKnown RBP15.17■□□□□ 0.02
SQLE-201ENST00000265896 PDCD10Q9BUL8 212 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 PLEKHA1Q9HB21 404 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 EXOSC3Q9NQT5 275 aaKnown RBP15.17■□□□□ 0.02
SQLE-201ENST00000265896 MTFP1Q9UDX5 166 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 FBXL21Q9UKT6 434 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 XRCC3O43542 346 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 UTS2O95399 124 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 RAB40ALP0C0E4 278 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 CTHP32929 405 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 RPS4XP62701 263 aaKnown RBP15.17■□□□□ 0.02
SQLE-201ENST00000265896 ADAM8P78325 824 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 ZNF141Q15928 474 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 ATG4DQ86TL0 474 aaPredicted RBP15.17■□□□□ 0.02
SQLE-201ENST00000265896 C19orf47Q8N9M1 422 aaKnown RBP15.17■□□□□ 0.02
SQLE-201ENST00000265896 METTL21AQ8WXB1 218 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 RAB40AQ8WXH6 277 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 CENPMQ9NSP4 180 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 PTTG3PQ9NZH4 202 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 PFDN2Q9UHV9 154 aa15.17■□□□□ 0.02
SQLE-201ENST00000265896 SDK2Q58EX2 2172 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 IGHV3-20A0A0C4DH32 117 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 SHISA8B8ZZ34 492 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 GABRA1P14867 456 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 CTLA4P16410 223 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 NAT1P18440 290 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 DMWDQ09019 674 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 C1orf189Q5VU69 101 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 CDC20BQ86Y33 519 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 G6PC3Q9BUM1 346 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 PPA2Q9H2U2 334 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 SYNDIG1Q9H7V2 258 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 MRPS18BQ9Y676 258 aaKnown RBP15.16■□□□□ 0.02
SQLE-201ENST00000265896 CLDN4O14493 209 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 XKRYO14609 159 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 KCNJ13O60928 360 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 NR0B1P51843 470 aaKnown RBP15.16■□□□□ 0.02
SQLE-201ENST00000265896 LUMP51884 338 aaPredicted RBP15.16■□□□□ 0.02
SQLE-201ENST00000265896 VWA2Q5GFL6 755 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 ELFN2Q5R3F8 820 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 UNQ6126/PRO20091Q6UXV3 157 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 TMEM184AQ6ZMB5 413 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 Q6ZS52 159 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 KCTD9Q7L273 389 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 RNF144BQ7Z419 303 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 CHST4Q8NCG5 386 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 OR1J4Q8NGS1 313 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 OR1S1Q8NH92 325 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 TPSD1Q9BZJ3 242 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 EMC9Q9Y3B6 208 aa15.16■□□□□ 0.02
SQLE-201ENST00000265896 TNFP01375 233 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 THEGLP0DJG4 465 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 AVPR2P30518 371 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 OLFML2AQ68BL7 652 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 WBP2NLQ6ICG8 309 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 KRT77Q7Z794 578 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 ZNF546Q86UE3 836 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 SEMA6CQ9H3T2 930 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 PCOLCE2Q9UKZ9 415 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 RWDD3Q9Y3V2 267 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 NAP1L6A6NFF2 107 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 EFCAB7A8K855 629 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 ZNF264O43296 627 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 RAB3DO95716 219 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 ZNF117Q03924 483 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 GK2Q14410 553 aaPredicted RBP15.15■□□□□ 0.02
SQLE-201ENST00000265896 RAB11BQ15907 218 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 ACKR1Q16570 336 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 KLHL26Q53HC5 615 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 KCTD20Q7Z5Y7 419 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 WDFY1Q8IWB7 410 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 PNPLA2Q96AD5 504 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 C4orf45Q96LM5 186 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 HIF3AQ9Y2N7 669 aa15.15■□□□□ 0.02
SQLE-201ENST00000265896 NOP16Q9Y3C1 178 aaKnown RBP15.15■□□□□ 0.02
SQLE-201ENST00000265896 OR2A4O95047 310 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms