RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 B3GLCTQ6Y288 498 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 DPY19L2P2Q6ZN68 376 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 SLC16A14Q7RTX9 510 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 HDDC2Q7Z4H3 204 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 JAZF1Q86VZ6 243 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 C17orf78Q8N4C9 275 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 SLC22A24Q8N4F4 322 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 PAPD5Q8NDF8 572 aaKnown RBP6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 OR52E2Q8NGJ4 325 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 AKAP1Q92667 903 aaKnown RBP eCLIP6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 NMD3Q96D46 503 aaKnown RBP6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 PLEKHF2Q9H8W4 249 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 SMURF2Q9HAU4 748 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 SRA1Q9HD15 236 aaKnown RBP6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 NGBQ9NPG2 151 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 OAZ3Q9UMX2 235 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 AMDHD2Q9Y303 409 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 UGT2A1Q9Y4X1 527 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 H3BNX3 289 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 SCG5P05408 212 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 CLUP10909 449 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 LAP3P28838 519 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 CALCRP30988 508 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 RAB1AP62820 205 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 KEAP1Q14145 624 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 RAB39AQ14964 217 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 ATP6AP1Q15904 470 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 KRT80Q6KB66 452 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 P2RY8Q86VZ1 359 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 SLC38A2Q96QD8 506 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 RBP7Q96R05 134 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 GPX7Q96SL4 187 aaPredicted RBP6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 PKP2Q99959 881 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 NDEL1Q9GZM8 345 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 MED20Q9H944 212 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 MGAT4BQ9UQ53 548 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 LAMP3Q9UQV4 416 aa6.31□□□□□ -1.4
DEPDC1B-201ENST00000265036 SETD2Q9BYW2 2564 aaPredicted RBP6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 HTR3EA5X5Y0 456 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 OR6C68A6NDL8 312 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 A6NIZ1 184 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 NPIPB13A6NJU9 1138 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 SHISA9B4DS77 424 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 NPIPB4C9JG80 1138 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 BHLHE40O14503 412 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 RAB36O95755 333 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 WNT11O96014 354 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 OR8G3PP0DMU2 310 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 CCNOP22674 350 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 EPHA2P29317 976 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 PYCR1P32322 319 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 PCYT1AP49585 367 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 NR1H2P55055 460 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 RAP1BP61224 184 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 RAP1AP62834 184 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 CRMP1Q14194 572 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 ANKDD1AQ495B1 522 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 C10orf128Q5T292 105 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 SHQ1Q6PI26 577 aaKnown RBP6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 SLC25A47Q6Q0C1 308 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 RASSF6Q6ZTQ3 369 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNF584Q8IVC4 421 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 LILRB1Q8NHL6 650 aaPredicted RBP6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 AKR7LQ8NHP1 331 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 TEX47Q8TBZ9 253 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 NABP1Q96AH0 204 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 ALG12Q9BV10 488 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNF416Q9BWM5 594 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 DGCR6LQ9BY27 220 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 OR10A4Q9H209 315 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 RNF121Q9H920 327 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 IL20Q9NYY1 176 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 COA3Q9Y2R0 106 aaPredicted RBP6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 POLR1DQ9Y2S0 133 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 G3V2T6 193 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 FARS2O95363 451 aaKnown RBP6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 HLA-DQA2P01906 255 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 SOD3P08294 240 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNF32P17041 273 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 APEX1P27695 318 aaKnown RBP6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 CDKN1AP38936 164 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 DAPP51397 102 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 THEM4Q5T1C6 240 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 GPR139Q6DWJ6 353 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 CORO6Q6QEF8 472 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 PAMR1Q6UXH9 720 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 LINC00346Q8IVM7 164 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 OR6V1Q8N148 313 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 PAQR4Q8N4S7 273 aaPredicted RBP6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 LINC00471Q8N535 108 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 OR2T33Q8NG76 320 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNRF4Q8WWF5 429 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 SLC7A6Q92536 515 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 FBXO17Q96EF6 278 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 RAB3IPQ96QF0 476 aaPredicted RBP6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 CIB1Q99828 191 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 KCNS3Q9BQ31 491 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 HCAR1Q9BXC0 346 aa6.3□□□□□ -1.4
DEPDC1B-201ENST00000265036 ZNF556Q9HAH1 456 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms