RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 CHAF1BQ13112 559 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 AMZ1Q400G9 498 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 FNDC3BQ53EP0 1204 aaKnown RBP11.92□□□□□ -0.5
NUP54-201ENST00000264883 MFSD12Q6NUT3 480 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 ADAM5Q6NVV9 412 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 DRAM2Q6UX65 266 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 REC114Q7Z4M0 266 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 OR4E2Q8NGC2 313 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 OR2A1Q8NGT9 310 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 ISOC2Q96AB3 205 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 ZBTB8AQ96BR9 441 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 PRSS27Q9BQR3 290 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 CERS4Q9HA82 394 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 C20orf141Q9NUB4 165 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 CACFD1Q9UGQ2 172 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 SHPKQ9UHJ6 478 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 LOC390937A0A1W2PQ73 354 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 TMEM72A0PK05 275 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 URADA6NGE7 173 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 BLOC1S5-TXNDC5H3BN57 136 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 MFNGO00587 321 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 DBIP07108 87 aaKnown RBP11.91□□□□□ -0.5
NUP54-201ENST00000264883 SFTPCP11686 197 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 CEBPBP17676 345 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 AQP2P41181 271 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 ZNF136P52737 540 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 DUSP2Q05923 314 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 RAB30Q15771 203 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 CDPF1Q6NVV7 123 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 TMPRSS12Q86WS5 348 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 SLC35F2Q8IXU6 374 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 GABRG1Q8N1C3 465 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 LINC01555Q8NAE3 123 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 CLEC1AQ8NC01 280 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 OR4K17Q8NGC6 315 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 OR13C2Q8NGS9 318 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 OR9A2Q8NGT5 310 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 MARS2Q96GW9 593 aaKnown RBP11.91□□□□□ -0.5
NUP54-201ENST00000264883 LURAP1Q96LR2 239 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 CNN2Q99439 309 aaKnown RBP11.91□□□□□ -0.5
NUP54-201ENST00000264883 MICU1Q9BPX6 476 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 SLC25A21Q9BQT8 299 aaPredicted RBP11.91□□□□□ -0.5
NUP54-201ENST00000264883 SULT4A1Q9BR01 284 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 POTEKPQ9BYX7 375 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 LMAN2LQ9H0V9 348 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 CHRDQ9H2X0 955 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 MYOZ1Q9NP98 299 aaPredicted RBP11.91□□□□□ -0.5
NUP54-201ENST00000264883 PPP1R14DQ9NXH3 145 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 SLC23A2Q9UGH3 650 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 TRAV18A0A075B6X5 111 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 IGKV1-8A0A0C4DH67 115 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 PRICKLE3O43900 615 aaPredicted RBP11.91□□□□□ -0.5
NUP54-201ENST00000264883 ZIC2O95409 532 aaPredicted RBP11.91□□□□□ -0.5
NUP54-201ENST00000264883 HLA-AP01891 365 aaKnown RBP11.91□□□□□ -0.5
NUP54-201ENST00000264883 ADH6P28332 368 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 PRSS3P35030 304 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 ELAVL3Q14576 367 aaKnown RBP11.91□□□□□ -0.5
NUP54-201ENST00000264883 ZNF750Q32MQ0 723 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 HNRNPA1L2Q32P51 320 aaKnown RBP11.91□□□□□ -0.5
NUP54-201ENST00000264883 ARHGAP11AQ6P4F7 1023 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 PAQR4Q8N4S7 273 aaPredicted RBP11.91□□□□□ -0.5
NUP54-201ENST00000264883 S100PBPQ96BU1 408 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 MESP1Q9BRJ9 268 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 TUBA4BQ9H853 241 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 CLDND1Q9NY35 253 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 MSRAQ9UJ68 235 aa11.91□□□□□ -0.5
NUP54-201ENST00000264883 C2orf16Q68DN1 1984 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 PRRC2BQ5JSZ5 2229 aaKnown RBP11.9□□□□□ -0.5
NUP54-201ENST00000264883 TEX13DA0A0J9YY54 714 aaPredicted RBP11.9□□□□□ -0.5
NUP54-201ENST00000264883 EPOPA6NHQ4 379 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 PPM1DO15297 605 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 FCMRO60667 390 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 RAB3DO95716 219 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 SNRNP70P08621 437 aaKnown RBP11.9□□□□□ -0.5
NUP54-201ENST00000264883 ADRA2CP18825 462 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 RPS4Y1P22090 263 aaKnown RBP11.9□□□□□ -0.5
NUP54-201ENST00000264883 S100A2P29034 98 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 CDK3Q00526 305 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 NR0B2Q15466 257 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 ATPAF1Q5TC12 328 aaPredicted RBP11.9□□□□□ -0.5
NUP54-201ENST00000264883 NKAIN2Q5VXU1 208 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 DHRS11Q6UWP2 260 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 TDHQ8IZJ6 230 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 OR51L1Q8NGJ5 315 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 RGP1Q92546 391 aaPredicted RBP11.9□□□□□ -0.5
NUP54-201ENST00000264883 ZDHHC4Q9NPG8 344 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 WSB2Q9NYS7 404 aaPredicted RBP11.9□□□□□ -0.5
NUP54-201ENST00000264883 SIGLEC7Q9Y286 467 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 MED31Q9Y3C7 131 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 TIMM10BQ9Y5J6 103 aa11.9□□□□□ -0.5
NUP54-201ENST00000264883 SYNDIG1LA6NDD5 238 aa11.9□□□□□ -0.51
NUP54-201ENST00000264883 CTAG2O75638 210 aa11.9□□□□□ -0.51
NUP54-201ENST00000264883 YIF1AO95070 293 aa11.9□□□□□ -0.51
NUP54-201ENST00000264883 CD5P06127 495 aa11.9□□□□□ -0.51
NUP54-201ENST00000264883 C8orf89P0DMQ9 161 aa11.9□□□□□ -0.51
NUP54-201ENST00000264883 CD80P33681 288 aa11.9□□□□□ -0.51
NUP54-201ENST00000264883 PNLIPRP3Q17RR3 467 aa11.9□□□□□ -0.51
NUP54-201ENST00000264883 ANKRD16Q6P6B7 361 aa11.9□□□□□ -0.51
NUP54-201ENST00000264883 ZNF227Q86WZ6 799 aa11.9□□□□□ -0.51
NUP54-201ENST00000264883 ZNF619Q8N2I2 560 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms